Pseudomonas shahriarae: HU773_015245
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Entry
HU773_015245 CDS
T07642
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU773_015245 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshh02044
]
HU773_015245 (tssB)
Secretion system [BR:
pshh02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU773_015245 (tssB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QXH87054
LinkDB
All DBs
Position
complement(3445139..3445636)
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AA seq
165 aa
AA seq
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MAKEGSVAPKERINITFKPAIGGAQEEVELPLKLLVLGDFTQREDTRKVEDRKPIGIDKN
TFDEVLAKQALSLQLGVPNRLQETDEADELPIQVRINAMRDFNPAQLVEQVPQLKKLMEL
REALVALKGPLGNTPSFRKAIESALADDQARARVLAELGLNSPDP
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggttcggtcgcccccaaggaacgcatcaacatcacgttcaagccggcc
ataggcggtgcccaggaagaggttgagctacccctgaagctgctggtcctgggtgacttc
acccagcgcgaagacacacgcaaggtcgaagaccgcaagcccatcggtatcgacaaaaac
acgttcgacgaggtgctggccaagcaagccttgagtctgcagctgggtgttcccaatcga
ctgcaggaaaccgatgaagccgatgagttgcccatccaggtccgcatcaacgccatgcgg
gacttcaacccggcccaactggtcgagcaggttccgcaattgaaaaagctgatggagtta
cgtgaggcgctggtcgcgctcaaaggccccctgggcaatacaccgagctttcgcaaggcc
atagaaagcgccttggccgatgaccaggcccgtgcacgggtattggccgaactggggctg
aacagccccgacccatga
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