KEGG   Pseudomonas shahriarae: HU773_015790
Entry
HU773_015790      CDS       T07642                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pshh  Pseudomonas shahriarae
Pathway
pshh03030  DNA replication
pshh03430  Mismatch repair
pshh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pshh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HU773_015790
   03430 Mismatch repair
    HU773_015790
   03440 Homologous recombination
    HU773_015790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pshh03032]
    HU773_015790
   03400 DNA repair and recombination proteins [BR:pshh03400]
    HU773_015790
Enzymes [BR:pshh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HU773_015790
DNA replication proteins [BR:pshh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HU773_015790
DNA repair and recombination proteins [BR:pshh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HU773_015790
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DUF1489
Other DBs
NCBI-ProteinID: QXH87155
LinkDB
Position
complement(3572661..3573383)
AA seq 240 aa
MNHVKAQPNHKMLEWSARFETLAGEAVNSRLRQFYQAGAVSAQASIESVQLLALDVETTG
LDAQADSIVSIGVMPFTLQRIYCGSSLYWVIKPASELKEKSVTFHHITHAEISDAPTFER
VLAPLLEAMAGKVMVVHYRNIERAFLDQAVRSHLGEGFEFPVIDTMQLEARLHRRKRGWF
ARLMGRSQPSIRLADSRARLGLPAYHAHHALTDALATAELLQAQVATHYSTSTPVGELWN
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaccacgtgaaagcgcagcccaatcataaaatgctggagtggtccgcgcggtttgag
acgctggcaggcgaggccgttaacagccgcttgcgacagttctatcaagccggcgcggtc
tcggcacaggcatccattgaaagcgtgcaattgctggccttggacgtagaaaccaccggc
cttgatgcacaggctgacagtattgtgagcatcggcgtcatgccgttcacgctgcagcgc
atttattgtgggagttcgctttactgggtgataaagccagcgtccgagctgaaggaaaag
tcagtgacgtttcatcacataacccatgctgaaatttcagatgctcccacctttgagcgg
gtgctggcgccattgctggaggccatggcaggtaaggtgatggtcgtccattaccggaat
attgagcgggcctttctggatcaggcagtgcgtagccatttaggggaggggtttgagttt
ccggtcatcgatacgatgcagttagaagcccgtctacaccggcgaaaacgcgggtggttc
gcccgacttatggggcgctcacaaccgtccataaggctggcggatagccgagcgcgcctt
ggccttccggcttatcacgctcaccatgcattaaccgatgccctggcgacggcagaactg
ttgcaggcgcaagtagcgactcattactcaacgtccacgcctgttggcgagttatggaac
tga

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