Pseudomonas shahriarae: HU773_017245
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Entry
HU773_017245 CDS
T07642
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshh03000
]
HU773_017245
Transcription factors [BR:
pshh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HU773_017245
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
MarR_2
DExH14_plug
Motif
Other DBs
NCBI-ProteinID:
QXH87427
LinkDB
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Position
complement(3905305..3906207)
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AA seq
300 aa
AA seq
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MTVKQMRAFLAVAQSLSFAAACERLHLSQSALSLTIKGLEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDELRQRFTLQRGRVTVAAMPSFAGNLLPPILKVFRARFPQV
NVTVHDLINEQVLEMVRDRQVELGVAFEPSPGSSLAFTPLYLDRFVAVVPGDSPLADMTA
IDWKTLLVQPFITLQRPSTVRVMLEEHLGALQMKLPVALESHQLATVGKMVASGLGVSAV
PALCAQQMEEAGARCITLCDPVIERPIGVLTKPGHELSAAAQALFDIFRDEAGKGRFPGI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacagttaaacagatgcgggcctttcttgccgtggcccagagcctgagttttgccgcc
gcctgtgagcgcctgcatttgtcccagtcggccctgagcctgaccatcaagggcctggag
gagggcctgggcgggcggctgttcagccgtaatacgcgcaacgtcgcgctgacccctgaa
ggcgaatccctgttgcccctggctcgccggttgattgccgactgggacaatgccgaggat
gaactgcgccagcgttttaccctgcagcgcgggcgcgtgacggtggcggcgatgccgtcg
tttgccggcaacctgctgccgccgatcctgaaggtgttccgtgcgcggtttccccaggtc
aatgtcacggtgcacgatttgatcaatgagcaggtcctggaaatggtccgtgatcgccaa
gtggagctgggtgtggcgtttgagccttcaccggggtcgtcgctggccttcaccccgctg
tatctggaccgctttgtcgcggtggtgcccggcgactcgccgctggcggacatgaccgcg
atcgactggaaaaccctgctggtgcaaccgttcattaccttgcagcggccttccacggtc
cgggtgatgctcgaggagcacctcggcgcgttacagatgaaactgccggtggcgttggaa
agccatcaattggcaaccgtgggcaagatggttgccagcggcctgggcgtcagcgccgtg
cctgcattgtgcgcacagcagatggaagaggcgggggcccgttgcatcaccttgtgtgac
ccggtgatcgagcggccgattggggtgctgaccaagccggggcatgagctgtcggcggcg
gcgcaggcactgtttgatatcttccgcgacgaagcggggaaggggcgattcccggggatt
taa
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