KEGG   Pseudomonas shahriarae: HU773_019055
Entry
HU773_019055      CDS       T07642                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pshh  Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:pshh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pshh02044]
    HU773_019055 (traD)
Secretion system [BR:pshh02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   HU773_019055 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87 Cpta_toxin LMWPc
Other DBs
NCBI-ProteinID: QXH87752
LinkDB
Position
4287059..4289227
AA seq 722 aa
MTQSHTIEALLRPAVELYTVAVCIVGAYLSLFAPWSLALTPLFGVTAALFFLGFGWVRLR
QALVVLRYRRNIRRLPRYVMTSKNVPVSNRRLFIGIGFKWEQRHTQRLMQTYRPEFRRYV
EPTALFQAVRHMEERMEYVSFPLNLLPKATSWDSPLNPVRPLPPVGGSPRLHGVEPIEVE
VSLPLGERVGHSLILGTTRVGKTRLAELFITQDIRRVKQVNGLPEFEPVIVFDPKGDADL
LKRIYIEAKRAGRKGEFYVFHLGWPDFSSRYNAVGRFGRISEVASRISGQLSGEGNSAAF
REFAWRFVNIIARALVELGVRPDYLKIQQHVINIDALFIEYSGYYFAKHDPKAWEVIVTI
EGALNEKNTPFNMRGRQKRVTAIDQYLAKTRVADPVMDGLRSAVRYDKTYFDKIVASLLP
LLEKLTTGRMAELISPNYTDLNDPRPIFDWMQVVRKRAIVYVGLDALSDPEVAAAVGNSM
FSDLVSVAGHIYKFGIGDGLPGGTCDQKIPINLHADEFNELMGDEFIPMINKGGGAGIQV
SAYTQTISDIEAKIGNRAKAGQVVGNFNNLFMLRVRETATAELLTKQLPKVDVYSTTLVS
GATDSSDPSGSTDFTSNTQDRVSSTSVPLIEPAHIVSLPKGQAFALIEGGNLWKVRMPLP
APDPDELMPKDLRALAENMRKSYVDGGGEWWTSSGTRNLDESLPAGLLDDVSAEAVQETP
HL
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgacccagtcgcacaccatagaagcgttgctccgtcctgctgttgagctgtacaccgta
gcagtatgcatagtcggggcttatctaagcctgttcgcgccatggtcactggcactgaca
cccttatttggtgttaccgcggctctgttttttctggggtttggctgggttcgtcttcgc
caagcgctggtggtgctgcgctatcgacgcaacatccgtcgcctgccgcgttacgtgatg
accagtaaaaacgttccagtcagtaatcggcgcctcttcattggcattgggttcaagtgg
gaacagcgtcatacacaacggctgatgcagacctacaggccagagtttcgtcgatacgtt
gagcctacagcgttgttccaagccgttcgccacatggaggagcgcatggagtacgtcagt
tttccgctgaacctgctgccgaaagcgacctcctgggacagccctctgaatcctgtgcgc
cctcttccacctgtgggaggctctccacgccttcatggggtcgaaccgatagaagtcgaa
gtgtcgctgcccttgggggagcgagtgggccatagcttgatcctgggcactacccgggta
ggtaagactcggctggctgagctgttcatcacccaggacattcgtcgggtgaaacaggtc
aacggattaccagagtttgaacccgtgattgtcttcgatccaaagggcgatgctgacctg
ctcaagcgcatatatatcgaagccaaacgtgctggcagaaagggagagttttacgtattc
catctaggttggccggacttttcctccaggtataacgccgtgggccgctttggacggatc
tcagaggtagccagcagaatttccgggcagttatcaggtgaaggcaatagtgcggcgttt
cgcgagttcgcctggcgcttcgttaacatcattgcccgcgcgctggtggagctgggtgtt
agacctgactacctgaagattcagcagcatgtgatcaatattgatgccttgtttatcgaa
tacagcggctactactttgccaagcatgatcctaaagcgtgggaagtgatcgtcaccatc
gaaggtgcgctgaacgaaaagaataccccgttcaatatgcgtggtcggcaaaaacgcgtg
acagccattgaccaataccttgcgaaaacccgggtagctgatcccgtaatggatggactg
cgttctgcagtgaggtatgacaaaacctacttcgacaaaattgttgcctcgcttcttccc
ctcctggagaagctgaccaccggccgcatggctgaactgatatccccaaattacacagac
ttgaatgacccacggcctatctttgattggatgcaggtcgtccgtaagcgcgcgatcgtg
tatgtcggtttggatgctttgtctgacccagaggttgccgcagccgtgggcaactcgatg
ttttccgacctggtgtcagtggctggccacatctacaaattcggcattggcgacggtcta
cccggcggtacctgcgatcagaagatcccgatcaatctgcatgccgacgagttcaacgag
ctgatgggggatgagttcatcccgatgatcaacaagggcggcggcgccggcattcaggtc
agcgcctatacccaaaccatcagcgacatcgaggccaagattggcaaccgcgctaaagcg
ggccaagtggtgggcaacttcaacaacttgttcatgctgagggtgcgcgagacagcgacg
gctgagctgctgaccaagcagttacccaaggtcgatgtgtactcaaccacgttagtgagc
ggcgccacagacagttcagatccctccggcagtaccgacttcaccagcaacactcaagac
cgggtcagctctaccagcgtgccgctgattgagccagctcacattgtcagccttcctaaa
ggacaggctttcgctctgatcgaaggaggaaatctctggaaggttcgcatgccgttgcct
gctccagatcccgatgagctgatgcccaaggatctaagagccctggccgagaatatgcgg
aagagctacgtcgatggcggtggcgaatggtggaccagtagcggaacacgcaacctggat
gaatcgttgccggcaggcttgctggatgacgtttcggcagaggccgttcaggagacaccg
cacctatga

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