Pseudomonas shahriarae: HU773_019560
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Entry
HU773_019560 CDS
T07642
Name
(GenBank) DEAD/DEAH box helicase
Organism
pshh
Pseudomonas shahriarae
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
QXH87844
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Position
4401082..4403775
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AA seq
897 aa
AA seq
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MPLTSSLTKPLAPSWANRFKEQSLERGRRYALENRVRIVESGDSTIIASCEGSGGNVYRQ
TISLRESAKGTLILVDSRCTCPVHTNCKHIAAVLLQVQETLAYPAAAKDAELLEKLQAVL
DNRVVLPQVVLEDVQPIPRLWLASIEFSAFEPRNGKMQRYIQHRAALSFNYQGNYVSGQK
NADIIVRQETQSLRIKRHPEVEQGFREHLRLLGFKIATRQSKALPESAGELFEMVNDSAW
LNFTLNASPSLRAAGWELQIDEDFGFDLSPVEDWYASVDEVPERDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPEKLARRRDDELILVNIPGLPNGGHGPLQVALPYGRLKPVLA
TLGEFYLQEPGTTALRLAKADAIRLNPLEDLPLQWEGGEQIRNFAQRLRDIKDFTCAAPE
GLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKIAGRLDRPCMV
VMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFAQLQDYDLLLTTYALLPKDIEQLAV
QPLHVLILDEAQYIKNPTSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWL
GDVKSFNRDYRVPIEKRGSDVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVDLNE
AQRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGS
SSGKLDSLMEMLDELFAEGRRILLFSQFTSMLSLIELELKKRGVAYALLTGQTRDRRTPV
KDFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFV
YKMIARGTVEEKIQALQQEKSDLAAGVLDGRTTGDWKLGNEDIEALFAPLPQKLEKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgacgtcgtcgctgaccaaacccctggctccgtcctgggccaaccgcttcaag
gaacaaagcctggagcgcggccggcgctacgccctggaaaaccgcgtaaggattgtcgag
tccggcgacagcaccatcatcgccagttgcgaaggctcgggcggcaatgtgtatcgccag
accatctccctgcgcgaatcggccaaaggcaccctgatcctggtggacagccgttgcacc
tgccccgtgcacaccaattgcaaacacatcgcggccgtgctgctgcaggtccaggaaacc
ctggcctacccggcggcggccaaggatgccgagctgctggagaaactgcaggccgtgctg
gataaccgcgtggtcctgccgcaagtggtgctcgaggatgtgcagccgattccccggctg
tggctggccagcatcgagttcagcgcctttgagccacgcaacggcaagatgcagcgctat
atccagcaccgggcggcgctgtcattcaattaccagggcaactatgtcagcggccagaaa
aacgccgacatcattgtccgccaggaaacccagagcctgcggatcaagcgccatcccgag
gtggagcaaggctttcgcgagcacctgcgcctgctgggcttcaagatcgccacccgccag
agcaaggccctgccggaaagcgccggcgagctgtttgagatggtcaatgacagcgcctgg
ctgaacttcaccctcaacgcctccccaagcctgcgggctgccggctgggaactgcagatc
gacgaggatttcggcttcgacctgagcccggtcgaggactggtacgccagcgtcgatgaa
gtgccggagcgcgactggttcgacctggagttggggattatcgtcaatggcgaacggctg
agcctgctgccgatcctgctgaacctgatgcgctcccacaccgaaatcctcaacccggaa
aagctcgcgcgccgccgcgacgacgaactgatcctggtgaacatccccggcctgcccaac
ggtggccacggcccgctgcaagtcgccctgccctacggccggctcaaaccggtgctggcg
accctcggtgagttctacctgcaggagcctggcaccaccgccttgcgcctggccaaggcc
gacgcgattcgcctcaacccgctggaagacctgccgctgcaatgggaaggtggcgagcag
atccgcaactttgcccagcgcctgcgcgacatcaaggacttcacctgcgccgcccccgag
ggcctcaacgccacgttgcgcccctaccagctcgaaggcctgagctggatgcagtccctg
cgccaactggaagtgggcgggattctcgcggatgacatgggcctgggcaaaaccctgcag
accctggcgcatattctcagcgaaaaaatcgccgggcgcctggaccggccgtgcatggtg
gtgatgcctaccagcctgatccccaactggctcgacgaagcggcgcacttcaccccgcag
ctcaaggtgctggcactgtacggtgccgggcgcaagaaacacttcgcccagttgcaggat
tacgacctgctgctgaccacctacgccctgctgcccaaagacatcgaacaactggccgtg
cagccactgcatgtgctgatcctcgacgaagcccagtacatcaagaaccccaccagcaag
gccgcccaggccgcccgcgagctgaatgcacgccagcgcctgtgcctgagcggcacgccc
ctggaaaaccacctgggcgagctgtggtcgctgttccacttcctgctgccgggttggttg
ggcgatgtaaaaagcttcaaccgtgactaccgcgtgcccatcgaaaaacgcggcagcgac
gtgcgattgcaacacctcaacggtcggatcaagccgttcctgctgcgccgtaccaaggaa
caggtggctactgaattgccgcccaagaccgagatcatccactgggtcgatctcaatgaa
gcccagcgcgatgtgtacgaaaccatgcgcctggccatggacaagaaggtgcgcgacgag
atcacccgcaagggcgtggcccgcagccagatcatcattctggaagcgctgctcaagctg
cgccaggtctgttgcgatctgcgcctggtaaacgacgccaccctgcccgcacgcggcagc
agttccggcaagctcgacagcctgatggagatgctcgacgagctgtttgccgaagggcgc
aggatcctgctgttctcgcagttcacctcgatgctcagcctgattgagctcgagctgaaa
aaacgcggggtcgcctacgccttgctgaccggccagacccgcgaccgacgcacgccggtc
aaggacttccagagtggcaagctgcagatcttcctgatcagcctcaaggcgggcggcgtg
gggcttaacctgaccgaagccgataccgtgatccactacgacccctggtggaacccggcc
acggaaaaccaggcgactgaccgtgcgtatcgcatcggccaggaaaagccagtgtttgtg
tacaagatgattgcccggggcaccgtggaagagaagatccaggcgctgcagcaagaaaag
tcagacctggcagcgggggtgctggatggccgcaccacgggcgactggaagctgggcaac
gaggatatcgaggcgctgtttgcgccgttgccccaaaagctagagaagcgttga
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