Pseudomonas shahriarae: HU773_021165
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Entry
HU773_021165 CDS
T07642
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh00061
Fatty acid biosynthesis
pshh00071
Fatty acid degradation
pshh01100
Metabolic pathways
pshh01212
Fatty acid metabolism
pshh02024
Quorum sensing
pshh04146
Peroxisome
Module
pshh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HU773_021165 (fadD2)
00071 Fatty acid degradation
HU773_021165 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HU773_021165 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU773_021165 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pshh01004
]
HU773_021165 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshh04147
]
HU773_021165 (fadD2)
Enzymes [BR:
pshh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HU773_021165 (fadD2)
Lipid biosynthesis proteins [BR:
pshh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HU773_021165 (fadD2)
Exosome [BR:
pshh04147
]
Exosomal proteins
Exosomal proteins of breast milk
HU773_021165 (fadD2)
Exosomal proteins of breast cancer cells
HU773_021165 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QXH88143
LinkDB
All DBs
Position
complement(4750171..4751859)
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRATGVPNELDLSAYKSVIEVFERSCKAFADRPAFSNMGITLTYADLERQSA
AFAGYLQHHTDLKPGDRIAVQMPNVLHYPIAVFGALRAGLVVVNTNPLYTPREMRHQFKD
AGIRALVYLNLFGSRVQEVAADTEIEYLIEAKMGDFMPAAKGWLINTVVDKVKKMVPAYS
LPRAVSFKRALRMGAGLAVTRHPMTLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACMSQLREDGHPLVKEGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIGGFI
KELKKWRFTGLLGLNTLFVALMEHPDFKTLDFSHLKITNSGGTALVKATAERWKQITGCS
IGEGYGLTETSPVASTNPYGDQSRLGTVGIPVPGTAMKVIDDAGVELPMGERGELCIKGP
QVMKGYWQQPAATAETLDAEGWLKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE
DVVMAHPNVANCAVIGVPDERTGEAVKLFVVARAQGVSLEELKTYCKANFTGYKVPKHIV
LRDSLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcgcaacaggcgttcccaatgagcttgacctg
tcggcgtacaagtcagtaatcgaagtcttcgagcgttcctgtaaagcctttgccgaccgt
ccggcattcagcaacatggggatcaccctgacctacgccgacctggagcgccagagtgcg
gcgttcgccggctacctgcaacaccacaccgatctcaagccgggtgaccgtattgcggtg
cagatgcccaacgtcctgcattacccgattgccgtgttcggcgccttgcgcgccgggctg
gtggtggtcaacaccaacccgttgtacaccccgcgggaaatgcgccatcagttcaaggat
gcgggcattcgtgcgctggtctacctcaacctgtttggttcccgggtccaggaagtggcg
gccgacaccgagatcgagtacctgatcgaagcgaagatgggcgacttcatgcccgccgcc
aagggctggctgatcaacaccgtggtcgacaaagtgaagaagatggtcccggcctacagc
ctgcctcgggcggtgtcgttcaagcgcgccttgcgcatgggcgcgggcctggccgtgacc
cgccacccgatgaccctcgatgacatcgccgtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgcgatgctcacccacggcaacctggtggcgaacatgcagcaggtgcgg
gcgtgcatgtcccagctgcgtgaagacgggcatccgctggtcaaggaagggcaggaggtg
atgatcgcgccgctgccgctgtatcacatctatgcctttacggcgaactgcatgtgcatg
atggtcaccggcaaccacaacgtgctgatcaccaatccacgggacatcggcggctttatc
aaggaattgaagaagtggcggtttaccgggttgctggggctcaacacactgtttgtcgcc
ttgatggagcacccggatttcaagaccctggacttctcccacctgaagatcaccaactcc
ggcggtaccgccctggtcaaggccactgccgagcgctggaagcagatcaccggctgttcc
atcggcgaaggctacggcctgactgagacgtcgccagtggccagcaccaacccctacggt
gatcaatcgcgcctgggcaccgtgggtattccagtgccgggcacggcgatgaaggttatt
gatgacgccggcgtcgagttgccgatgggcgagcggggcgagttgtgcatcaagggcccg
caggtcatgaagggctactggcagcaaccggcggccactgccgagaccctggacgccgag
ggctggctcaagactggcgatattgcggtgatcgaccccgacggttttgtgcgcattgtc
gaccgcaagaaagacctgatcatcgtctcgggcttcaatgtgtaccccaacgagatcgaa
gacgtggtgatggcccacccgaacgttgccaactgcgcggtgatcggcgtgcctgacgag
cgtaccggcgaggcggtgaaactgttcgtggtggcgcgggcccagggtgtcagccttgag
gagctgaagacttactgcaaggccaacttcaccggctacaaagtgcccaagcacattgtg
ttgcgcgactcgctgccgatgacgccggtaggcaagatcctgcgcagagagcttcgcgat
atcgcctga
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