Pseudomonas shahriarae: HU773_022335
Help
Entry
HU773_022335 CDS
T07642
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pshh
Pseudomonas shahriarae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
TIP49
AAA_22
MCM
OKR_DC_1_N
AAA_18
APS_kinase
HTH_24
nSTAND3
AAA_7
DUF3410
AAA_30
AAA_2
DUF815
Motif
Other DBs
NCBI-ProteinID:
QXH88365
LinkDB
All DBs
Position
complement(4999474..5000871)
Genome browser
AA seq
465 aa
AA seq
DB search
MTHNILVVDDEPKLCDLLSSALSQNHIQVFIAGNGLHALKVLEQEDIDLVISDWRMPGMD
GPQLLAEIKVRYPQLPVIVMTAYSTVKNAVQSMRNGAYDYIAKPFDIDELDITVAKALQF
RDIMRDNARLRAELDEHAQFDSLVGESPAFRRVLQAVDSVRESNATILLTGESGTGKEMV
ARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDL
YYRLNVFPIPLPALRERVEDIAPLARHFARSLSANAGKRITGFSPDALQAMAAYNWPGNI
RELQNCVERATIVASSPVIEDIDLPAYLFASQPTERDVTTILSEGPGVPQDLDAALAEVE
KAYILAALQESNGVQAAAASRIGISERSFWYRLKKLGIQIDKIVR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacacataacatattggtggtcgacgacgagcccaagctctgcgatttgctgtcgtcg
gccctgagccagaaccatatccaggtgtttatcgcgggcaatggcctgcatgcgctcaag
gtgctggagcaggaggacatcgacctggtgatcagcgactggcgcatgcccggcatggac
ggcccgcaactgctggccgagatcaaggtgcgctacccgcaattgccggtgatcgtgatg
acggcctacagcaccgtgaaaaatgccgtgcagtccatgcgtaacggtgcctacgactac
attgccaagcccttcgatatcgacgagctggacatcaccgtggccaaggccttgcagttt
cgcgacatcatgcgcgacaacgcacggctgcgtgccgaactcgatgaacatgcgcagttc
gatagcctggtcggggaaagcccggcgttccgtcgagtgttgcaggcggtggattcggtg
cgtgaaagcaacgccaccatcctgttgactggcgaaagcggcaccggcaaagaaatggtc
gcccgcgccattcacaagcatggcaaccgtgcagacaagccttttgtggcggtcaactgc
gccgcgatccccgaaggcttgctggaaagcgaaatgttcggccatcgcaagggcgcgttt
accggcgccgtggccgaccgggtagggcgctttatgcaggccgacaagggcacgctgttt
ctcgacgaagtgggggatatgcccctggcgttgcaggccaagatcctgcgcgccttgcag
gaacgggtgatcgagccggtcggcgacccgcgtgagcgcaaggtggacgtgcgggtgatc
gccgccaccaacaagaacctgctggaagcggtggcgaacaaggagtttcgcgaagacctc
tactaccgcctgaatgtgttcccgatcccactgccagcattgcgcgagcgcgtcgaagac
atcgccccgctggcccgccactttgcccgcagcctgagtgccaacgccggtaaacgcatc
accggcttcagccccgacgccttgcaggccatggccgcctacaactggccggggaacatc
cgcgagctgcaaaactgcgtggagcgcgcgaccatcgtcgcctccagcccggtgattgaa
gatatcgacctgccggcctacctgttcgcgtctcagccgaccgagcgggatgtgacgaca
atcctcagcgaaggcccaggcgtgccccaggacctggacgcggcgctggccgaggtggaa
aaggcctacatcctcgcggccctgcaggagagcaatggcgtacaggcggctgcggcgtcg
cggattggcatctccgaacgcagcttttggtaccgcttgaaaaagcttgggatccaaatc
gacaaaatcgtacgctga
DBGET
integrated database retrieval system
