Pseudomonas shahriarae: HU773_023220
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Entry
HU773_023220 CDS
T07642
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshh03009
]
HU773_023220
Ribosome biogenesis [BR:
pshh03009
]
Prokaryotic type
ribosomal protein modification factors
HU773_023220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QXH88526
LinkDB
All DBs
Position
complement(5206304..5208493)
Genome browser
AA seq
729 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCS
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLMPAAASDAGTFIAGKDLPLEQTIANMSAILAGLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANAAFVHYPEERWFKPGRKDALPTEILDEYCLKIYNRDGELRGSHLIDTNSGNEERGIV
SLPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPAEVLAKYPSILAGIQALEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDYAFVEWDFSGQGEDSNAEEAATLFGILEGMGKQVYMAVYEHIGAKACRILVPDY
SEIYPVDDLIWDNTNKALFFRADILNLHSLDEDGLQALVERLVESELDDYTDITTLIGIE
FDDNTAWGQLTILELKLLIYLALQQYEEAKEAVEMFLQYNDNTVERGLFYQAVNAVLEMQ
LDEDLELEDYEANFRRMFGNERMDAAIGSVEGSVRFHGLTPTSMKLEGLDRHLRLIDSYK
KLHAARANS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaacctccggcttgaagccaagttcgatgacttc
accgtggtggccgaccagccgattcgctacaagggcgatggctcggcccccggtccgttc
gactacttcctggcttcgtcggcgttgtgtgcggcttactttgtgaagttgtactgcagc
acgcgcaatatccccacggacaatatccgcctgtcgcagaacaatattgtcgacccggaa
aaccgctacaaccagatcttcaagattcaggtcgagttgccggcggatatttccgacaag
gatcgccagggcatcctgcgctccattgaccgctgcacggtcaagaaagtggtacaggcc
gggcccgagtttgttatcgaagaggtggaaaacctcgacgccgacgcccaggcgttgctg
atgccggcggctgcgtcagacgcgggcaccttcatcgcgggcaaggacctgccgctggag
cagaccatcgccaacatgtcggccattctcgcgggcctgggcatgaagattgaaatcgcc
tcgtggcgcaatatcgtgcccaatgtctggtcgttgcatatccgcgatgcccattcgccg
atgtgctttaccaacggcaagggcgcgaccaaggaaggcgcactggcgtcggccctggga
gagtttatcgagcgcctgaactgcaatttcttctacaacgaccagttctggggcgaagac
atcgccaacgcggcgtttgtgcattacccggaggagcgctggttcaagcccggccgtaaa
gacgcgctgccgacggaaatcctcgacgagtactgcctgaaaatctacaaccgcgatggc
gagttgcgcggctcacacctgatcgataccaactccggcaatgaagaacgtggcatcgtc
tcactgccgtttgtgcgtcagtctgacggcgaggtggtgtatttcccctccaacctcatc
gaaaacctctacctgagcaacggcatgagtgccggtaacaccttggctgaggcccaggtg
cagtgcctgtcggagattttcgagcgtgcggtgaagcgcgaaatcattgaaggtgaattc
gccttgccggatgtcccggctgaagtgctggccaaatacccaagcatcctcgccggtatc
caggccctggaagagcagggtttcccggtgctggtcaaggatgcgtccctgggcggcgag
ttcccggtgatgtgcgtgaccctgatgaacccgcgcaccggcggcgtatttgcctcgttt
ggcgcccacccaagcctggaagtggcgctggagcgaagccttaccgagttgcttcagggc
cgcagcttcgaaggcctgaacgacttgccgcagccgacctttgaagggcatgcggtgacc
gagccgaacaactttgtcgagcacttcatcgactccagcggcgtggtgtcgtggcgcttc
ttcagtgccaagtccgattacgcgttcgtggagtgggatttttccggccagggcgaagac
tccaacgccgaagaggccgcgactttgttcggtattctcgaaggcatgggcaagcaggtc
tacatggcggtgtacgagcatatcggcgccaaggcctgccgcatcctagtgccggactat
tcggaaatctatccggttgacgacctgatctgggataacaccaacaaggcgttgttcttc
cgcgccgatatcctcaacttgcacagcctggatgaagacggcctgcaagcgctggtcgag
cgcctggtggaaagtgaactggatgattacaccgatatcaccaccctgatcggcatcgaa
tttgacgacaacacggcttggggccagttgacgatccttgagttgaagctgctgatctat
ctcgccttgcagcagtatgaagaggcgaaggaagcggtggagatgttcctgcaatacaac
gacaacaccgtcgaacgcggcctgttctaccaggcagtgaatgcggtgctggagatgcag
ttggacgaggatttggagctggaagactacgaggccaacttccgccggatgtttggcaac
gagcgcatggacgccgccattggttcggtggagggcagcgtgcggttccatggtttgacc
ccgaccagcatgaagctcgaaggcctggatcgacacctgcggctgatcgacagctacaaa
aaactgcacgccgcacgggccaacagctag
DBGET
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