KEGG   Pseudomonas shahriarae: HU773_024325
Entry
HU773_024325      CDS       T07642                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pshh  Pseudomonas shahriarae
Pathway
pshh03030  DNA replication
pshh03430  Mismatch repair
pshh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pshh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HU773_024325
   03430 Mismatch repair
    HU773_024325
   03440 Homologous recombination
    HU773_024325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pshh03032]
    HU773_024325
   03400 DNA repair and recombination proteins [BR:pshh03400]
    HU773_024325
Enzymes [BR:pshh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HU773_024325
DNA replication proteins [BR:pshh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HU773_024325
DNA repair and recombination proteins [BR:pshh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HU773_024325
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 RNase_H_2
Other DBs
NCBI-ProteinID: QXH88732
LinkDB
Position
complement(5436437..5437048)
AA seq 203 aa
MERIAVIDFETTGISPSSSCRATEIAVVILEQGQIVDRYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPTAPNHKLGTLTSYAQLPHTGKAHRAMADAEMAANLTAHLAQELRRTHGLRELTHD
LLCSLQKVPAAKINDHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtatagcggtcatcgactttgaaaccaccggcatctcgccgagcagcagttgc
cgggccacggaaatcgccgtggtcatcctggagcagggccagatcgtggaccgctaccag
agcctgatgaacgccggtgtgcgcgtgccggggtttatcgagcagctgaccggcatcagc
aatgccatgctgcgcagcgcgccgccggccgagcgggtgatgaacgaggtcaatgaattt
gttggcaccacgccgctactggcgcacaacgccgcgttcgaccagaagttctgggacttc
gaactgggcctgatccgccgcacccgcctgcaaaaattcgcctgctcgctgctcctggcc
cgccggctgatgcccacggcgcccaaccacaaactcggcaccctgacgtcttatgcgcaa
ttgccccacaccggcaaggctcaccgggcgatggcggatgctgaaatggcggccaacctc
accgcccacctggcccaggaactgcgccgcacccacggcttgcgcgagttgacccatgat
ctgctgtgcagcctgcaaaaagtgccggcagcgaagatcaatgaccatctgaagaaacat
cgcgggttctga

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