Pseudomonas shahriarae: HU773_024500
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Entry
HU773_024500 CDS
T07642
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh03030
DNA replication
pshh03430
Mismatch repair
pshh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU773_024500 (holA)
03430 Mismatch repair
HU773_024500 (holA)
03440 Homologous recombination
HU773_024500 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshh03032
]
HU773_024500 (holA)
03400 DNA repair and recombination proteins [BR:
pshh03400
]
HU773_024500 (holA)
Enzymes [BR:
pshh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU773_024500 (holA)
DNA replication proteins [BR:
pshh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU773_024500 (holA)
DNA repair and recombination proteins [BR:
pshh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU773_024500 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QXH88764
LinkDB
All DBs
Position
5474423..5475460
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLAKHLQGNLAPVYIVSGDDPLLCQEAADTIRQAARQQGFDERQVFSADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCARPAEDTLLLISLPKLDGSA
QKTKWGKALVEGAQTQFIQIWPVDSSQLPQWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQGAVADSARFDVFGLVDAILNGDAAHALRMLEGLRGE
GVEPPVILWALARELRLLANIALQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRHSAQ
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMSGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaactcgccaaacacctgcaaggcaacctcgcgcctgtgtac
atcgtcagtggcgatgatccgctgttgtgccaggaagccgccgacaccattcgccaggct
gcgcgccagcaaggctttgatgaacgccaggtgttcagcgccgacgccagcttcgactgg
ggcaccctgctccaggccggggccagcatgtcgctgtttgccgaaaaacgcctgctggaa
ctgcgcctgccctcgggcaagcccggcgacaaaggcgcggcggccctgatggaatactgc
gcccgccccgccgaggacacgctgttgctgatcagcctgcccaagctcgatggcagcgcg
cagaaaaccaaatggggcaaggcgctggtggaaggggcacagacccagttcatccagatc
tggccggtggacagcagtcagttgccgcaatggattcgccaacgcctgtcgcaagccgga
ttgtctgccagccaggacgcggtcgaactgatcgcggcccgggttgaaggcaacctattg
gcggcggcccaggaaatcgaaaagctcaagctgatggccgaaggtggccagatcaccgtc
gagaccgtgcagggcgcggtggccgacagcgcacgctttgacgtattcgggctggtggac
gcaatcctcaacggtgatgcggcccacgccttgcgcatgctcgaagggctgcgcggtgaa
ggggtcgagccgccggtgattctctgggcgctggcccgggaactgcgcttgctggccaat
atcgccctgcagtacagccagggcacccctctggacaaggccttcagccaggcccgcccg
ccggtgtgggacaagcgcaagcccctgatgagcaaggccctgcaacggcactcggcgcaa
cgctgggcgcaattgttgctcgaagcccaacgcatcgacgcgcagatcaagggccaggcc
gcagggtcgccgtggatgagcttgagccgtttgtcgctgctgatgtccggccagcgcctg
gcactgcccgccgaatag
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