Pseudomonas shahriarae: HU773_024820
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Entry
HU773_024820 CDS
T07642
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh00900
Terpenoid backbone biosynthesis
pshh01100
Metabolic pathways
pshh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HU773_024820 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pshh01006
]
HU773_024820 (ispA)
Enzymes [BR:
pshh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HU773_024820 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HU773_024820 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
HU773_024820 (ispA)
Prenyltransferases [BR:
pshh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HU773_024820 (ispA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QXH88824
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All DBs
Position
5545456..5546343
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AA seq
295 aa
AA seq
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MIDVYQASSQARVNAALEPLFVAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGV
DAAQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLSGVNAEIRLRMVTALAAAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHK
TGALIEAAVHLGALASGRAEAAQLAALQIYARAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPSLLGLDAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgtttatcaggccagcagtcaggcccgggtcaatgctgcgctggaaccgctg
tttgtggcgccaagcccggagttggccaggctgtatgaagccatgcgctatagcgtgatg
aacggcggcaagcgcgtacggcctttgctcgcctatgcggcctgtgaggcgctgggcgtg
gacgccgcgcaagccaatggcgcggcgtgtgcggtggaattgattcatgcctattcgctg
gtgcatgacgatttgccagccatggacgatgacgatctgcgtcgcggccagcccactacc
cataaggcttttgacgaagcctgtgcgatcctcgccggcgacggcctgcaaagcctggcg
ttcagtgccctgctcgacccgcgtttgagcggtgtgaatgccgagatccgcctgcgcatg
gtcactgcgttggccgccgccgcaggcccggccggtatggtcgggggccaggcaattgac
ctcggctcggtcggcctcaagctggaccagcaagccctggagtatatgcaccggcacaag
accggggcgctgatcgaggctgccgtgcacctcggcgccctggccagtggtcgcgccgaa
gcggcgcagttggctgctttgcagatctatgcccgggccatcggcctggcgttccaggtg
caggacgatattctcgacgtggaaagcgataccgcgaccctcggcaagcgccagggcgcc
gatattgcccgtgacaagccgacttatccgtcgctgttagggctggatgccgccaaggcc
tatgccctggagctgcgcgaccaggccctggccgccctgcgaccattcgacgcggcagcc
gagccgctgcgtgacctggcgcggtatatcgtcgaacgccgccactga
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