Pseudomonas shahriarae: HU773_025815
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Entry
HU773_025815 CDS
T07642
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh00260
Glycine, serine and threonine metabolism
pshh00460
Cyanoamino acid metabolism
pshh00630
Glyoxylate and dicarboxylate metabolism
pshh00670
One carbon pool by folate
pshh00680
Methane metabolism
pshh01100
Metabolic pathways
pshh01110
Biosynthesis of secondary metabolites
pshh01120
Microbial metabolism in diverse environments
pshh01200
Carbon metabolism
pshh01230
Biosynthesis of amino acids
pshh01240
Biosynthesis of cofactors
pshh04981
Folate transport and metabolism
Module
pshh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HU773_025815
09102 Energy metabolism
00680 Methane metabolism
HU773_025815
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HU773_025815
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HU773_025815
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HU773_025815
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HU773_025815
Enzymes [BR:
pshh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HU773_025815
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QXH89011
LinkDB
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Position
complement(5741363..5742616)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALINAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEAMEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDNLGDADVEANVAKHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacaagaccagatccagggatatgacgacgcactgctggcggccatgaat
gccgaggagcagcgccaggaagatcatatcgagctgatcgcgtcggagaactacaccagc
aagcgtgtgatgcaggcccagggcagcggcctgaccaacaaatacgccgaaggctaccct
ggcaagcgctactacggcggctgcgagcatgtggataaagtcgaggccctggccatcgag
cgcgccaagcaactgttcggcgccgattacgccaacgtgcagccgcactccggttcgtcc
gccaacagtgcggtgtacctggcgctgatcaatgccggtgacaccatcctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaggtgtcgtcgtcgggcaagctgtac
aacgcggtgcagtacggcatcaacaccgacaccgggctgatcgactacgacgaagtcgag
cgcctggccgtggaacacaagccgaagatgatcgttgccggcttctccgcctattccaag
accctggacttcccgcgttttcgcgccatcgccgacaaggtcggtgcgctgctgttcgtt
gacatggctcacgtcgccggcctggtggctgcgggtctgtacccgaacccgctgccttac
gccgatgtggtcaccaccaccacccacaaaactttgcgcggtccgcgtggcggcttgatc
ctggccaagtccaacgaagagattgagaaaaaactcaactccgctgtattccccggcgcc
cagggcggcccattgatgcatgtgatcgcgggcaaggcggtgtgcttcaaggaggcaatg
gagccaggcttcaaagcgtatcaacagcaggtgatcgacaacgcccaggccatggccagc
gtgtttatcaaacgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgatccgccagggcctgaccggcaaggacgcagacgccgccctcggtcgcgcc
cacatcaccgtcaacaagaacgccgtgcccaatgacccgcagtcgccgttcgtgacttcg
ggcctgcgcatcggtaccccggcggtgaccacccgtggtttcaaggtgacgcaatgcgtg
gagctggcgggctggatctgcgacatcctcgacaacctcggtgacgccgatgtcgaggcc
aatgtggccaagcacgtgtctgcgctgtgcgctgatttcccggtttatcgctga
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