Pseudomonas shahriarae: HU773_025940
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Entry
HU773_025940 CDS
T07642
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HU773_025940 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshh02000
]
HU773_025940 (choW)
Transporters [BR:
pshh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
HU773_025940 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Trp_oprn_chp
DUF3464
Motif
Other DBs
NCBI-ProteinID:
QXH89036
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Position
5768394..5769239
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AA seq
281 aa
AA seq
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MLTEQKIPLGQYIAAFVEWLTQNGADYFDAIASTLETMIHGVTFALTWFNPLALIGLIAL
LAHYIQRKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKP
MFYTVMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP
QELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV
VNALNTADIALGFEAGLAIVLLAIMLDRICKQPDAKVGGDA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgactgaacagaaaatcccactaggccagtacatcgctgccttcgtcgaatggttg
acgcagaacggcgccgattatttcgacgcgatcgcatcgacactggaaacgatgatccac
ggcgtgacgtttgcgctgacctggttcaatccgctggcattgatcggtctgattgcgctg
cttgctcactacattcaacgtaagtgggggctgactgtatttgtgattgcctccttcctg
ctgatcctcaacctggggtactggcaggaaaccatggagaccctggcccaggtgctgttc
gccaccctggtctgcgtggtcatcggtgtgccgctgggcattgttgccgcgcacaaaccg
atgttctacaccgtgatgcgcccggtgctcgacttgatgcagaccgtgccgacctttgtt
taccttatcccgaccctgaccctcttcgggctgggtgtggtgcctggcctgatctccacg
gtggtgttcgcgattgccgcgccgatccgcctgacctacctgggtatccgcgatgtaccg
caagagttgatggatgccggcaaggcctttggctgctcgcgccgccagttgctctcgcgc
atcgaactgccccacgccatgccgagcatcgctgccggtattacccaatgcatcatgctg
tcgttgtcgatggtggtgatcgcggccctggtgggcgccgacggcctcggcaaacccgtg
gtcaacgcgctgaacaccgccgacattgccctgggctttgaagccggcctggcgattgtg
ctgctggccatcatgctcgaccgcatctgcaaacaacccgacgccaaagtagggggtgat
gcatga
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