Pseudomonas shahriarae: HU773_025995
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Entry
HU773_025995 CDS
T07642
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pshh
Pseudomonas shahriarae
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshh03009
]
HU773_025995 (dbpA)
Enzymes [BR:
pshh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HU773_025995 (dbpA)
Ribosome biogenesis [BR:
pshh03009
]
Prokaryotic type
rRNA helicases
HU773_025995 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QXH89047
LinkDB
All DBs
Position
5783407..5784792
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AA seq
461 aa
AA seq
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MTTIATAFNTLPLSAAMLANLDSLGYAEMTQIQAQSLPVILKGLDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVMCPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSLGPQIA
SLEHGAHVIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIEDIISKTPAR
RQTLLFSATYPVSIKQLASKFMRAPQQVKAEAFHSDEQIEQRFYEISPEERMDAVTKVLS
HFRPASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDSLDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVAPSEAHRAQAIE
LLQKAPLNWDQLSNLKSQGGAPLLPVMSTLCIAAGRKDKVRPGDILGALTGEAGIPGAQV
GKIAIFDFQAYVAVERSVAKQALQRLNDGKIKGRSLRVRIL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccatcgccaccgcttttaatactttgccgctctccgccgccatgctggctaac
cttgactcgctgggttatgccgagatgacgcagatccaggcgcaaagcttgccggtgatc
ctcaaggggctggacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctgttgaacccgatcaacccgcgctacttcggttgccaggccctggtgatg
tgcccgacccgcgagctggctgaccaggtggccaaggaaatccgccgcctggcccgcgcc
gaagacaacatcaaggtgctgaccctgtgcggcggcgtgtccctcggcccgcagatcgct
tccctggagcatggcgcccacgtcatcgtcggcaccccgggccgcatccagcaacacctg
cgcaagggttcgctggtgctggacggtttgaacacgctgatcctcgatgaagccgaccgc
atgctcgacatgggtttctacgacgccatcgaagacatcatcagcaagaccccggcccgt
cgccagaccctgttgttctcggccacctacccggtgagcatcaagcaactggcctccaaa
ttcatgcgcgcgccgcagcaggtcaaggccgaagcgttccactccgatgagcagatcgag
cagcgtttctacgaaatctccccggaagagcgcatggacgcggtgaccaaggtgctgtcg
cacttccgtccggcctcttgcgtggccttctgctttaccaagcagcaagtgcaggaaacc
gtggatcacctgaccgccaagggcatttctgcagtcggcctgcatggcgacctggaacag
cgcgaccgtgaccaggtgctggcaatgttcgccaaccgcagtacttcggtactggtggcc
accgacgtggcggcccgaggcctggacattgactcgctggacatggtgatcaacgtcgaa
ctggcccgcgattcggaaatccacattcaccgcgtcggccgtaccgggcgtgccggtgag
accgggatcgccatcagcctggtggcgccgtccgaggcacaccgtgcccaggccatcgaa
ctgctgcaaaaggccccgctgaactgggatcaactgagcaacctcaaatcacagggcggc
gcgccgctgctgccggtgatgagcacgttgtgcattgctgccggtcgtaaagacaaggtc
cgcccaggcgacatcctcggcgcgctgaccggtgaagccgggatcccgggcgcccaggtg
ggcaagatcgcgatctttgacttccaggcctatgtggcagtggagcgtagcgtcgccaag
caggcgttgcagcgcttgaatgacggcaagatcaagggccgttcgttgcgcgtgcggatc
ctgtaa
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