Pseudomonas shahriarae: HU773_027225
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Entry
HU773_027225 CDS
T07642
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh00300
Lysine biosynthesis
pshh00470
D-Amino acid metabolism
pshh01100
Metabolic pathways
pshh01110
Biosynthesis of secondary metabolites
pshh01120
Microbial metabolism in diverse environments
pshh01230
Biosynthesis of amino acids
Module
pshh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU773_027225 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU773_027225 (lysA)
Enzymes [BR:
pshh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HU773_027225 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QXH89284
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Position
6036548..6037795
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AA seq
415 aa
AA seq
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MDAFNYRNGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRTFADALEGTPSLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTREDMRRALEIGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTSLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLVADYVKAVRERTEGRDLKLIFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSAVRPRDSAPRTYDIVGPICETSDFLAKDRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccggaacggcgagctgttcgcggaaggcgtggcgctgtccgcg
attgccgaacgcttcggcaccccgacctatgtgtactcgcgagcgcatatcgaagcgcaa
taccgcacctttgccgatgcactggagggcacgccaagcctggtgtgctatgcagtaaaa
gccaactccaacctgggtgtactcaatgtcctggcgcgcctgggcgctggttttgacatc
gtgtcccgtggcgagctggagcgtgtactggccgcaggcggcaaggctgacaaaatcgtg
ttctccggggtcggcaagacccgcgaagacatgcgccgcgccctggaaatcggcgtgcat
tgcttcaacgtcgagtccaccgacgagctggagcgcctgcaagtggtggccgccgagatg
ggcgtgcgtgcgccgatctccctgcgcgtcaacccggatgtcgatgccggtacccacccg
tacatttccaccggtctcaaagagaacaagttcggcatcgcgattgccgacgccgaagac
gtgtatatccgcgccgcccaactgccaaacctggaagtactgggtgtggactgccatatc
ggttcgcaactgaccagtctgccccccttcctcgatgccctcgaccgcctactggcgctg
atcgaccgcctcggcgagtgcggcatctacctgcaccacattgatctgggcggtggcgtg
ggcgtgcgttatcgcgacgaagagccgccgctggtggccgactacgtcaaggccgtacgc
gagcgcaccgaaggccgcgacctgaagctgatattcgagccgggccgctacatcgttgcc
aatgcaggcgtactgctgacccaggtcgagtacctcaagcacaccgaacacaaggatttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gatgtcagcgccgtgcgcccgcgcgacagcgccccgcgcacctatgacatcgtcggcccg
atttgtgaaaccagcgacttcctggccaaggaccgtgaactggccctggcagaaggcgat
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagctccaactacaacacc
cgcgggcgtaccgccgaagtgttggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtaa
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