Pseudomonas shahriarae: HU773_027230
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Entry
HU773_027230 CDS
T07642
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh00300
Lysine biosynthesis
pshh00470
D-Amino acid metabolism
pshh01100
Metabolic pathways
pshh01110
Biosynthesis of secondary metabolites
pshh01120
Microbial metabolism in diverse environments
pshh01230
Biosynthesis of amino acids
Module
pshh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU773_027230 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU773_027230 (dapF)
Enzymes [BR:
pshh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HU773_027230 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QXH89285
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Position
6037799..6038629
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKLWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDIRSDGQISVDM
GAPRLVPADIPFQAEAQALSYPLDVDGTVVEVAAVSMGNPHAVLRVNDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVKMTGPASRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgactttatggtccttgacctg
gtcagccagcacgcgcatatcctgcccaagcacgccaagctgtggggcgaccgccatacc
ggcatcggcttcgatcagttgctgatcgtcgaggcgccaagcaatccggaggtggatttc
cgttaccggatcttcaactccgacggttccgaagtggaacagtgcggcaacggtgcgcgc
tgcttcgcccggttcgtgctggacaagcgcctgaccgccaaacggcagattcgcgtcgag
accaaaagcggcattatcgagctggatatccgcagcgacggccagatcagcgtcgacatg
ggcgccccgcgcctggtgccggccgatattccgttccaggctgaggcccaggccttgagt
tatccactggatgtcgacggcactgtggtcgaggtggccgctgtgtccatgggcaacccc
catgcggtgctgcgggtcaacgacatcaacaatgcgccggtgcatgaactgggaccgaag
atcgaacatcacccgcgctttccggcgcgggtcaacgtcggcttcctgcaggtcatcgac
cgctcccgtgcgcaattgcgcgtgtgggaacgcggcgccggggaaacccaggcttgtggc
accggcgcttgcgccgccgccgtggctgcgatcagccagggctggatggattcgcccctg
ttgatcgacctgcccggcggacgcctgtccatcgaatgggcaggcccaggccaaccggtg
aagatgaccggcccggcatcccgtgtatacgaaggacaggtccgtctatga
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