KEGG   Pseudomonas shahriarae: HU773_027230
Entry
HU773_027230      CDS       T07642                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pshh  Pseudomonas shahriarae
Pathway
pshh00300  Lysine biosynthesis
pshh00470  D-Amino acid metabolism
pshh01100  Metabolic pathways
pshh01110  Biosynthesis of secondary metabolites
pshh01120  Microbial metabolism in diverse environments
pshh01230  Biosynthesis of amino acids
Module
pshh_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pshh00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HU773_027230 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HU773_027230 (dapF)
Enzymes [BR:pshh01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HU773_027230 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QXH89285
LinkDB
Position
6037799..6038629
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKLWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDIRSDGQISVDM
GAPRLVPADIPFQAEAQALSYPLDVDGTVVEVAAVSMGNPHAVLRVNDINNAPVHELGPK
IEHHPRFPARVNVGFLQVIDRSRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVKMTGPASRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctgggcaatgactttatggtccttgacctg
gtcagccagcacgcgcatatcctgcccaagcacgccaagctgtggggcgaccgccatacc
ggcatcggcttcgatcagttgctgatcgtcgaggcgccaagcaatccggaggtggatttc
cgttaccggatcttcaactccgacggttccgaagtggaacagtgcggcaacggtgcgcgc
tgcttcgcccggttcgtgctggacaagcgcctgaccgccaaacggcagattcgcgtcgag
accaaaagcggcattatcgagctggatatccgcagcgacggccagatcagcgtcgacatg
ggcgccccgcgcctggtgccggccgatattccgttccaggctgaggcccaggccttgagt
tatccactggatgtcgacggcactgtggtcgaggtggccgctgtgtccatgggcaacccc
catgcggtgctgcgggtcaacgacatcaacaatgcgccggtgcatgaactgggaccgaag
atcgaacatcacccgcgctttccggcgcgggtcaacgtcggcttcctgcaggtcatcgac
cgctcccgtgcgcaattgcgcgtgtgggaacgcggcgccggggaaacccaggcttgtggc
accggcgcttgcgccgccgccgtggctgcgatcagccagggctggatggattcgcccctg
ttgatcgacctgcccggcggacgcctgtccatcgaatgggcaggcccaggccaaccggtg
aagatgaccggcccggcatcccgtgtatacgaaggacaggtccgtctatga

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