Plesiomonas shigelloides: SAMEA2665130_0093
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Entry
SAMEA2665130_0093 CDS
T04378
Symbol
cmpR_1
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K02521
LysR family transcriptional regulator, positive regulator for ilvC
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_0093 (cmpR_1)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SAMEA2665130_0093 (cmpR_1)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
HTH_AraC
HVO_A0261_N
HTH_23
Motif
Other DBs
NCBI-ProteinID:
SBT59679
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Position
1:complement(102025..102912)
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AA seq
295 aa
AA seq
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MDLRDLKLFLHLADSCHFGRSAQACHVSPSTLSRQIQRLEEEAGQPLFVRDNRSVTLTDA
GRQLRHFAEQTLLNWQQLQHQLRPQADDLQGELRLFCSVTAAYSHLPAILDRFRLRYPKV
EIKLSTGDAADAVGRVLQDAADLAIAARPEPLPASAAFVSLGEIPLALVIPTIACQVRQQ
VLQQPVPWAQVPFILPEHGPARRRIEQWLRLRHVTHPHIYATVAGHEAIVSMVALGCGVA
AIPTVVVENSPVRDRVAKLEGESLDFVPFDLGVCAQKKRLHEPLLAAFWNTVSAP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcgtgatttgaaactgtttttgcatctggccgacagctgccattttggccgc
agcgcccaagcttgccatgtcagcccttccaccttatcgcgccaaattcagcgcctagaa
gaggaagcggggcaaccgttgtttgtgcgcgataaccgtagcgtcaccctaaccgatgcc
ggtcgtcagctgcgccactttgccgagcaaaccttgctcaattggcagcagctacaacat
cagctgcgcccacaagccgatgatctgcaaggggagctgcgtctgttctgctcggtgacc
gccgcctacagccacttgccggccattttggaccgttttcgcctgcgttacccgaaagtg
gagatcaaactcagcaccggcgatgcggccgatgcggtggggcgcgtgttgcaagatgcg
gcagatttggcgatcgccgcccgtcccgagccgctaccggcctcggcggcgtttgtctca
ctgggcgaaattccgctggcgctggtgatccccaccatagcctgtcaggtacgccaacaa
gtcttacaacaaccggtgccgtgggcacaggtgccgtttatcttgccggagcacggccca
gcgcggcggcgtatcgagcagtggctgcgcctccgacatgtcacacatccgcacatatat
gcgaccgtcgccggccatgaagccatagtgtcaatggtggcgctcggttgcggggtggcc
gccattcccaccgtggtggtagaaaacagcccggtgcgcgatcgagtggccaaattggaa
ggggaatcgctggattttgtgccgtttgatctgggggtctgcgcgcagaaaaaacgctta
catgagccgctattagccgcgttttggaatacggtcagcgcgccataa
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