Plesiomonas shigelloides: SAMEA2665130_0116
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Entry
SAMEA2665130_0116 CDS
T04378
Symbol
arnB_1
Name
(GenBank) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase
KO
K26217
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00541
O-Antigen nucleotide sugar biosynthesis
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SAMEA2665130_0116 (arnB_1)
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
DUF1967
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
SBT59700
UniProt:
Q9S0X9
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Position
1:128478..129632
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AA seq
384 aa
AA seq
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MKNFIPFALPEIGEEEIAEVIDSLRSGWITTGPKAKQFEQEFSNYLGANVQSLAVNSATS
GLHLALEAVGVKPGDQVIVPSYTFTATAEIVRYLGADPVIVDVDRKTFNISVDAIEKAIT
NKTKAIIPVHFAGLACDMDSILSIAKKYDLKVVEDAAHAFPTTYKGSKIGTLDSDATVFS
FYANKTMTTGEGGMVVSKNKDIIERCKVMRLHGISRDAFDRYQSKTPSWFYEVVAPGFKY
NMPDICAAIGIHQLRKIDDFQKKRQRMAKIYDDALKELPLELPEWPTNASDIHAWHLYPI
RLKTDSAINRDDFIKKLSDLGIGCSVHFIPLHKQPVWRDTYNLNASDFPVSEACYLNEIS
IPLYTKMTDQDQLFVIESIRQLFM
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattttattccttttgcgttacctgaaattggcgaagaagaaattgcagaggta
attgactctttacgttcaggttggattacgacaggtcctaaggctaagcaatttgaacaa
gaattttctaattacctaggagcgaacgttcaatcattagctgttaactctgctacgtcg
ggcttacatttggctcttgaagctgttggcgtaaaacctggagaccaagttattgtccca
tcatatacattcactgctactgccgaaattgtcaggtaccttggtgctgatcctgtaatt
gttgatgtagatcgtaaaacatttaatatatcagttgatgccattgagaaggctattact
aataaaacaaaggcgattattccagtacacttcgctggattagcttgtgacatggattca
atcttatcaattgctaaaaaatatgacctaaaggttgtcgaggatgccgctcatgcattt
cctacaacatataaaggaagtaagataggaacgcttgattcagatgctacggtttttagc
ttctacgccaataaaactatgacaaccggtgaaggcggaatggttgtttcaaaaaataaa
gatataattgagcgttgtaaggtaatgcgtttacatggaatcagtcgtgacgcttttgac
cggtaccagtctaaaactccttcttggttttatgaggttgtagctccagggtttaaatac
aatatgcctgatatctgtgcggcaatcggtattcatcaacttagaaagatcgatgatttt
cagaaaaaacgtcaacgaatggcaaaaatttacgatgatgcgttaaaagaattgccactt
gaattgcctgaatggcctactaatgctagtgatattcatgcttggcatctatatcctatc
cgcttaaaaactgattcggctattaatcgcgatgattttattaagaagttatcagatctt
ggaattggttgttctgtccattttataccgttgcataagcaaccggtttggcgtgataca
tataatttgaacgccagtgactttccagtttctgaggcgtgttatttaaatgaaatatct
attcctctttatactaaaatgacggatcaagatcagttgttcgttatcgaatcgattaga
caattatttatgtaa
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