Plesiomonas shigelloides: SAMEA2665130_0125
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Entry
SAMEA2665130_0125 CDS
T04378
Name
(GenBank) ATP-dependent helicase HepA
Organism
pshi
Plesiomonas shigelloides
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SBT59709
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All DBs
Position
1:138346..142161
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AA seq
1271 aa
AA seq
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MSLLLHPLHIEVLCQLSASFSLPVAALAQRVESHFPWLPSSLLDDVLTALQQAELLECEG
SESERHYLLSPNGGWALLRLLQRGELTLASLPSSNDPLMQAWQALLQAALTPAAALPLCD
ADSGYWLDMLADAEWLWAGIGYLPLKWIAPFARYALLRQIRTQCEPNFWQQAQAVLDTQG
LTALYQGWTGCAFLCSAGTLPANHWLHRIARSAPAQRQLPSEQELPVDAVFSRLLAALLL
PPERGTAALTQIQQQLRAVENWPAAHYCARLLAADVDSADRLLELQGEEPPRWGDLLLFA
LRAVQQGAGPDEQRRQRSAFAHIMRYPPRAPLIALTQALLRALAGEPATYSLFNSLFPDG
LRRPAAPVPELSEPTLADEMATNSSADERVVWILAPKTKQLTARIQKRGKKGWTKGRQVS
IYNLRLEAERLLDEDDLRVYRATNPQEHYFYRDVLVDEPLLQALSRHPRVLLPEGERLIL
LPLQPLVRLLPAQEGDGVRCLLNPRLAVEAGTLRQVAATVWQFYQLPAPLVPLLRSLQRT
PSDLPPSAVASLQTLITRWPQQPWYSEHPQLQGNVQVSEWLPTPYLWLNWSGDTLEIQLT
TQPEQEWPHPLPPGQGEAWIMDPQDHLHWLRRDLAAELAQAQVWQQLFATGQHNHGGSGE
QPTRWRWQGAEAIAMLHTLQSCPERHSARLLWHKESPRAYRVDTDDLKLRVNDREQWFAL
DGELQLEELKLASLDQLLRHEPQAYITLDDGQILLLTARLQQQLATLRHLVAADQSFTQQ
LAFPLQQLLQQQAVPGDPHWQALTERWQQPVAIAPDLLAPLRAYQCEGVRWLAHLSEHGF
GACLADDMGLGKTVQALTLLRLRRQQGPALVVVPKSVLHNWACEVQRFAPELVLHDVEQS
EDRQQLIANAGAGEVIIISYGLLARCASWLSARDWATVILDEAQQIKNANTQRARSLFRL
RAQARIALSGTPVENDLTELWSLFAFINPGLLGSKAQFMRQYASAVRDSDSLQRLRALVS
PFILRRTKRQVLTELPEKTEITHSVSLSEQERALYEQARNQTLLELAAEPERGAGMTLLS
GLTRLRQICCHPQLSFPDYQGSASKLEETLLLVAEALAGQHRVLIFSQFVGLLTLLRHEL
EARGLGYSYLDGRSSSTARQQAVADFKQGKHPLFLISLKAGGTGLNLTEADTVIHLDPWW
NPAVEDQASDRAHRMGQTQPVTVYRLVAEDTIEEKIVALHAEKRELADKVLSGQSQVDKL
DSELLYQLLTE
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtctttattacttcaccctttgcatattgaagtgctgtgtcagctgtcggccagtttc
agtttaccggtcgcggcgttggcccaacgggtggagtcgcattttccctggctgccttca
tcgttactggacgacgtgctgaccgccttgcagcaagccgagctgttggagtgcgaaggc
agcgagtcagagcgccactatctgttaagcccgaacgggggttgggcgctgctgcgttta
ttgcaacgcggtgagctgactctcgcgagtttacccagcagtaacgatcccttgatgcaa
gcgtggcaggcactattgcaggccgcacttaccccagcggcggcattgccgttatgtgat
gccgatagcggctattggctcgatatgctggcggatgccgagtggttgtgggctgggatt
ggctatcttccgcttaagtggatcgcaccgtttgcgcgttatgccttgttgcgccagatc
cgcacccagtgtgagccgaatttttggcagcaggcgcaagctgtgctggatacgcagggg
ttaacggctttgtatcaaggctggaccggctgtgcgtttttatgttcagccggaacgtta
ccggccaaccattggctgcatcgcattgctcgcagtgcgccagcccagcgtcagttgcca
tctgagcaagagttgccggtggatgcggtcttttcccgtctactggcggcgctattgctg
ccaccagagcgcggtactgccgcgttgacccagatccagcaacagctgcgagcggtagaa
aattggccggcggcacactactgcgcgcgcctgttggccgccgatgtcgacagtgccgac
cgtctgctggagctgcagggagaggagccaccacgctggggcgatctgctcttgtttgcg
ctgcgcgccgtgcagcaaggcgcaggccctgatgaacagcggcgccagcgcagcgcgttt
gcccatatcatgcgttatccgccgcgtgccccgctgattgcgttaactcaagctttatta
cgggcactggccggtgagccggcgacctattcactcttcaattcactgttcccagacggt
ttacgtcgtccggcggcgccggtgccggagttgtctgaaccgacattagcggacgagatg
gctaccaacagcagcgccgatgagcgggtggtgtggatcttagcgccgaaaaccaagcag
ctgactgcgcgcattcaaaaacgtggcaagaagggctggaccaaagggcggcaggtcagc
atttacaatctgcgtttagaagccgagcgtttgctggacgaagacgacctgcgcgtctat
cgcgcgactaacccgcaagagcactatttttatcgtgatgtgctggtggatgagccgctg
ctgcaagcgctgagccggcatcctcgggtcttattgccggagggcgagcgcctgattttg
ttgccgctgcagcctttggtgcgtttgttacccgcgcaagaaggcgacggcgtgcgttgc
ctgctcaatccgcgtttggcggtggaagccgggacattgcgccaagtggcggccacggtc
tggcagttttatcagttgccggcgcctttagtgccgttgttgcgctcattgcagcgcacc
ccgagtgatttaccgccgagcgcggtggcatccttgcagacattgataacccgctggccg
cagcaaccgtggtacagcgagcatccgcaattacagggcaatgtgcaggtctccgagtgg
ttgccgaccccgtatctgtggctgaactggagcggcgatacgctggaaatccagctgacc
acccagccagagcaagagtggccgcatccgctcccgcctgggcaaggtgaagcgtggatc
atggatccgcaagatcatctgcattggctacgtcgtgatctggcggccgaactggcgcaa
gcgcaggtttggcagcagttgttcgcgaccggtcagcataaccatggtggcagtggtgag
cagccaacgcgttggcgctggcaaggagccgaagcgattgccatgctgcacaccttgcag
tcatgcccagagcggcacagtgcgcgtttgctgtggcacaaggaaagtccacgtgcctat
cgggtcgataccgacgatcttaagttacgggtcaatgaccgtgagcagtggtttgccctc
gacggtgagctgcaactggaagagctgaaactggcctcactggatcagctactgcgtcat
gagccgcaagcctatatcaccttggatgacgggcaaattttgttgctgactgctcgtttg
cagcagcagctggcaactttgcgccatttggtggcggcagatcaaagctttacccagcaa
ctggccttcccgttgcagcagttactgcagcaacaagcggtgccgggcgatccgcactgg
caggcgttgaccgaacgctggcagcagccggtggcgattgcaccagacttattagcgccg
ctgcgcgcctatcaatgcgaaggggtacgctggttggcgcacctgagcgaacatgggttt
ggcgcttgtctggccgatgacatgggccttggtaaaaccgtgcaggcgctaacgttgctg
cgtttacggcggcaacaaggtccagcgctggtggtggtgccgaaatcggtcttgcacaac
tgggcctgcgaagtgcagcgcttcgcccctgagttggtgttgcatgatgtggagcaaagc
gaagatcgccagcagcttattgccaacgcgggcgctggggaagtgattatcatcagttat
ggcttgctggcgcgttgtgccagttggctcagtgcgcgtgattgggccaccgtgattctg
gatgaagcccagcagattaaaaacgccaacacccagcgtgcacgctcgctgttccgtttg
cgcgcgcaggcgcggattgccctcagtggcacgccggtggaaaacgacttaaccgagctg
tggagcctgttcgcctttattaacccagggctactcggcagcaaagcgcagtttatgcgc
caatatgcctcggccgtgcgtgacagcgatagcttgcaacgtctgcgcgcgctggtctcg
ccgtttattttacgccgcactaagcgtcaggtgctgactgaactgccggagaaaaccgaa
atcacccacagcgtaagcttaagtgagcaagagcgggcgctgtatgaacaggcgcgtaat
cagaccttactggagctggcggcagagcctgagcgtggcgcggggatgaccttgctttct
gggctgacgcgtttgcgacaaatttgctgccatccgcaactgtcattccctgattatcaa
ggcagtgccagtaagctggaggaaaccctgttgctggtggcggaagcgctggccggccag
catcgggtcctgattttcagccagttcgttgggttgttgacgttactgcgccatgaatta
gaggcgcgtggcttggggtacagttatctggatgggcgcagttcatccaccgctcgtcag
caagcggtggccgatttcaaacaagggaagcacccgttattcctgatcagcttgaaagct
ggcggtaccggtttgaacctgaccgaggcggatacggtgatccatctggatccgtggtgg
aatccggcggtcgaagatcaggccagcgatcgggcgcaccgtatggggcaaacccagcca
gtcacggtgtatcgcttggtcgcagaagatacgatcgaagagaaaattgttgcgctgcac
gccgaaaaacgcgagttggcagacaaggtgctcagtggccagtcacaagtcgataagctc
gatagcgagttgttgtatcagctgttgacggaatag
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