Plesiomonas shigelloides: SAMEA2665130_0165
Help
Entry
SAMEA2665130_0165 CDS
T04378
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshi03009
]
SAMEA2665130_0165 (rsmD)
Enzymes [BR:
pshi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
SAMEA2665130_0165 (rsmD)
Ribosome biogenesis [BR:
pshi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SAMEA2665130_0165 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_37
Methyltransf_31
PCMT
Methyltransf_24
RrnaAD
Methyltr_RsmB-F
TRM5-TYW2_MTfase
RsmJ
TRM
CMAS
N6-adenineMlase
ApbA
Motif
Other DBs
NCBI-ProteinID:
SBT59748
LinkDB
All DBs
Position
1:complement(189544..190164)
Genome browser
AA seq
206 aa
AA seq
DB search
MARRSPTTAKNPTGQIRIISGQWRGRKLPVPDSPGLRPTTDRVRETVFNWLAPVLHGARC
LDCFTGSGALGLEALSRYASEVIMLEYERNVAEQLRKNVQLLKSEQAKVIQTDSLQYLAQ
PGQPFDVVFIDPPFRRGMLHDCCRLLEQNNWLSAGAYIYVEAELEAGDLPVPHNWRLHRE
KTAGQVAYRLYIRGTEEAPAEADDVA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgatctccgacaacagcaaaaaatcctaccggtcaaatccggattatcagc
ggacagtggcgtggacgcaaactgcccgtcccagacagtccgggcctgcgcccaaccacc
gacagggtacgggaaaccgtctttaactggctggcgccggtgctgcatggggcgcgctgc
ctcgattgctttaccggtagcggagcgctggggttagaagcgctgtcccgctatgccagt
gaagtcattatgctggaatatgagcgcaatgtagccgaacagctgcgaaaaaacgtgcaa
ttgttgaaatccgagcaagccaaggtgattcagaccgacagtctgcagtatctggctcaa
ccggggcagccgtttgatgtggtgttcatcgatccaccttttcgccgcggcatgctgcac
gattgctgtcgcctgttagagcaaaataattggctcagcgcaggggcttatatctatgtc
gaggccgaattagaggccggcgacctgcccgtgccgcacaactggcgcttacaccgcgag
aaaactgccggccaagtggcctatcgcttgtatattcgtggcacggaagaggcgcctgcg
gaggctgacgatgtggcttaa
DBGET
integrated database retrieval system
