Plesiomonas shigelloides: SAMEA2665130_0320
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Entry
SAMEA2665130_0320 CDS
T04378
Symbol
fis
Name
(GenBank) Hin recombinational enhancer-binding protein
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_0320 (fis)
03036 Chromosome and associated proteins [BR:
pshi03036
]
SAMEA2665130_0320 (fis)
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_0320 (fis)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAMEA2665130_0320 (fis)
Chromosome and associated proteins [BR:
pshi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
SAMEA2665130_0320 (fis)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAMEA2665130_0320 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
Baseplate_J_C
INT1_R3
DUF8487
Phage_NinH
HTH_30
Motif
Other DBs
NCBI-ProteinID:
SBT59897
LinkDB
All DBs
Position
1:complement(338136..338432)
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AA seq
98 aa
AA seq
DB search
MFEQRVNSDVLTVATINAQDQVTHKPLRDSVKQSLKNYFAQLNGQDVNELYELVLAEVEQ
PLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaacgcgttaattctgacgtactgactgttgctactattaatgctcaggat
caggtcactcacaaaccactgcgtgactccgtaaaacagtcgctgaagaactacttcgct
cagttaaacggccaagacgttaatgagctgtacgaattagtactggctgaagttgaacag
cctcttctcgatatggtcatgcagtacactcgcggcaaccaaacccgtgcagcactgatg
atgggtatcaaccgtggcactctgcgcaagaagctgaagaaatacggtatgaactaa
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