Plesiomonas shigelloides: SAMEA2665130_0338
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Entry
SAMEA2665130_0338 CDS
T04378
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshi03019
]
SAMEA2665130_0338 (rng)
03009 Ribosome biogenesis [BR:
pshi03009
]
SAMEA2665130_0338 (rng)
Messenger RNA biogenesis [BR:
pshi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA2665130_0338 (rng)
Ribosome biogenesis [BR:
pshi03009
]
Prokaryotic type
rRNA processing factors
SAMEA2665130_0338 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
SBT59915
UniProt:
A0A1A9AUR1
LinkDB
All DBs
Position
1:357496..358965
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AA seq
489 aa
AA seq
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MTAELLINVTPSETRIAMVEGGVLQEVHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDI
GLEKAAFLHASDIVPHTECVADTEQQQFRVRDIAELVRQGQDIMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEVERERLKSIVSQQCDELGGFIIRTAAEGVGEA
ELAQDAAFLKRLWSKVLQRKTRQGSRTTLYGELAIGQRILRDFVGTELARIRVDSRQMFE
VLTEFTREYVPELTDKFELYTGRQPIFDLFDIENEIQRVLDRKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMLSEEHRRRV
LHSLEQALGKDRVKTNINGFTQLGLVEMTRKRTRESLEHVLCGECPTCQGRGTVKTVESV
CYEILREIVRVHHAYDADQFLVYASAAVADALRGEESHALAELELFIGKQVKIQTEPLYQ
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgagctattaatcaacgttactccgagtgaaacccggatcgcgatggtcgag
ggcggggtattacaggaagtccatattgagcgcgaggccaaacgcgggatcgtcggcaat
atttataagggaaaagtcagccgggtattgccggggatgcaagccgcttttgtcgatatt
ggtctggaaaaggccgcgttcttgcacgcttctgacatcgttccgcataccgagtgcgta
gcggacaccgagcaacaacaatttcgcgtgcgcgatattgccgagttggtgcgccaaggg
caagacatcatggtgcaggtggttaaagatccgcttggcaccaaaggggcgcgcttgacc
acggatatcacgctgccttcacgctatctggtgtttatgccaggggcgagccatgtcggc
gtatctcagcggatcgagagcgaagttgagcgcgagcgtttgaaaagcattgtctcgcag
cagtgcgacgaactgggcggttttattattcgcaccgccgccgaaggcgtgggcgaagcg
gagctggcgcaagatgcggcgtttttaaaacgtctgtggagtaaagtgctgcagcgtaaa
acccgtcagggcagccgaactaccttgtacggtgagttggcgattggtcagcgcattttg
cgcgactttgtcggtactgaattagcgcgtattcgtgtggactcgcgacagatgtttgaa
gtgctgaccgaatttacccgcgaatatgtgccagagctgacggacaagttcgagctgtat
accggtcgccaaccgattttcgacctgtttgatatcgaaaatgagatccagcgggtgctg
gatcggaaagtggagctcaaatcgggcggttatttgattatcgatcagaccgaagcgatg
accaccatcgatatcaacacgggcgcttttgttgggcatcgcaatttagaagagactatc
ttcaataccaacatcgaagcgactcaagctatcgctcgtcagctgcgcctgcgtaattta
ggcggcatcatcattatcgattttatcgatatgctgagtgaagagcaccgtcggcgcgta
ctgcactcgctagagcaagcgctgggcaaagatcgggtcaaaaccaacatcaacgggttt
acccagttggggctggtggagatgacgcgtaagcgcactcgtgagagcttagagcacgtg
ttgtgtggcgaatgcccgacctgccaagggcgcggtacggtcaagaccgtagaaagtgtc
tgttatgagatcctgcgcgaaatcgtgcgggtgcatcatgcctatgacgccgatcagttt
ttggtgtatgcctcggcggcagtggcggatgcgctacgcggcgaggagtcgcatgcactg
gccgagctggagctgttcatcggaaaacaggttaaaattcaaactgaaccgctctatcaa
caagagcagtttgatgtcgtcatgatgtga
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