Plesiomonas shigelloides: SAMEA2665130_0390
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Entry
SAMEA2665130_0390 CDS
T04378
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00470
D-Amino acid metabolism
pshi00550
Peptidoglycan biosynthesis
pshi01100
Metabolic pathways
pshi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAMEA2665130_0390 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA2665130_0390 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMEA2665130_0390 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshi01011
]
SAMEA2665130_0390 (ddlB)
Enzymes [BR:
pshi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SAMEA2665130_0390 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pshi01011
]
Precursor biosynthesis
Amino acid ligase
SAMEA2665130_0390 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
GARS_A
Decapeptide
TTL
TPP_enzyme_C
GSP_synth
Motif
Other DBs
NCBI-ProteinID:
SBT59966
LinkDB
All DBs
Position
1:407442..408353
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AA seq
303 aa
AA seq
DB search
MTEKVAVLLGGTSAEREVSLNSGAAVVAGLREAGFDAHPIDTREISVADLPAQGFSRAFI
ALHGRGGEDGSMQGMLEQIGLPYTGSGVLASALAMDKMRTKLIWQALGLPLAAYETVTFG
QLEDARLTAIIARLGLPLMVKPSLEGSSVGMSKVTRAEELRPALEKAFEHDSTVLVEQWL
SGPEYTVAIVGDQVLPSIRIQAAGTFYDYQAKYLSDETGYFCPSGLNAEQEQQIAALAKT
AYDALGCRGWGRVDVMMDGQGEFKLLEVNTAPGMTSHSLVPMAARQAGMSFSQLVAKIIG
LAV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaagtcgcagtattgctgggcggaacctccgcggaacgtgaagtctccctg
aactcaggtgctgccgttgtggcaggtctgcgtgaagccggctttgatgctcatccgatt
gatacccgggagatcagcgtcgctgatttgccggcacagggatttagccgcgcgtttatc
gctctgcacggtcgaggtggtgaagatggctccatgcaggggatgctggagcaaattggt
ttgccatacaccgggagtggtgtactggcctcggcgctggcgatggataagatgcgtacc
aagctgatctggcaagcgctgggcctgccgttggccgcgtatgaaactgtcacatttggc
cagttggaggatgcgcgtctcaccgctataatcgcgcgccttgggttgccgctgatggtc
aaaccctctctggaaggctccagtgtgggcatgagcaaagtgacccgcgccgaagagctg
cgtccggcgctggaaaaagcgtttgagcatgacagcaccgtgttggttgagcagtggctg
agtggtcctgagtatactgttgcgattgtcggcgatcaggtgttgccatccatccgtatt
caagccgccggcaccttttatgactatcaggccaaatacctgtccgatgagaccggttat
ttctgcccgagcggtctgaatgccgagcaagagcaacagatcgcggcactggcgaaaacc
gcctatgacgcactgggttgccgtggctggggccgcgtagatgtgatgatggatggtcag
ggcgaattcaaactgctggaagtgaataccgcaccgggcatgaccagtcacagcttagta
ccgatggcggcacgtcaggctgggatgagcttttcgcaattagtggctaaaattatcgga
ctggctgtctaa
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