Plesiomonas shigelloides: SAMEA2665130_0412
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Entry
SAMEA2665130_0412 CDS
T04378
Symbol
pdhR_2
Name
(GenBank) Pyruvate dehydrogenase complex repressor
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_0412 (pdhR_2)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAMEA2665130_0412 (pdhR_2)
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Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR_2
MarR
HTH_24
HTH_11
TrmB
Fe_dep_repress
HTH_Crp_2
SlyX
Motif
Other DBs
NCBI-ProteinID:
SBT59988
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All DBs
Position
1:430118..430882
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AA seq
254 aa
AA seq
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MAYSKIRQPKLSDVIEQQLERLILEGTLRPGQKLPPERELAVQFDVSRPSLHEAIQRLEA
KGLLLRRQGGGTFVQQQLWHSFSDPLSELLSSHPESQFDLLETRHALEGVSAYYAALRGT
DADFARVRESQQAIVAAQAKDDPAAEADAVMQYLVVVSEASHNVVLLHLVRCLAPLLEQN
VKQNFELLYARREKLAQVSSHRAEIVDAILARQPEAAREASHRHLAFIEETLLELSREHS
RQERSLRRLQQRRD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcctacagcaaaattcgtcagccaaagctgtctgatgtgattgaacagcagctggaa
cgcctgatattggaaggaacattacgcccggggcagaagctgccaccggagcgggaactg
gcggttcagtttgatgtttcgcgcccgtcattacatgaagctattcagcgccttgaggca
aaagggttactcctgcgccgtcagggcggcggcactttcgtgcagcaacaactctggcac
agtttcagtgatccgctcagtgagttgttatcttcccacccggagtcacagttcgatttg
ctagagacgcgtcatgcgctcgaaggcgtgtcggcctattacgcggcactgcgtggtacg
gatgcggattttgcgcgcgtacgcgagagtcagcaggcgattgtggcggcgcaagccaaa
gatgatccggcggccgaagccgatgcggtgatgcagtatctggtggtggtgagtgaggcg
tcccataacgtggtgttattacacctggtgcgctgcttagctccgctgctggagcagaat
gtaaaacagaattttgagctgctgtatgcccggcgtgaaaagctggcgcaggtcagcagc
caccgagctgaaattgtggacgcaattttggctcgtcagccggaggcggcacgcgaagca
tcgcaccgtcatttggcctttattgaggaaactttgctggaacttagccgtgaacacagc
cgtcaagaacggtcgttgcggcggctgcagcaacgcagggattga
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