Plesiomonas shigelloides: SAMEA2665130_0502
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Entry
SAMEA2665130_0502 CDS
T04378
Symbol
appA_1
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA2665130_0502 (appA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshi02000
]
SAMEA2665130_0502 (appA_1)
Transporters [BR:
pshi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SAMEA2665130_0502 (appA_1)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Peptidase_U40
Motif
Other DBs
NCBI-ProteinID:
SBT60073
UniProt:
A0A1A9AVB6
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All DBs
Position
1:complement(551549..553225)
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AA seq
558 aa
AA seq
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MLRKTKIAVALLAAVTSGLSATATVAAEKSMVTIVPDFFTAFVRNFNPYLNTSLRTTNDF
IYEPLVVFNEMKGNEPVFRLATGFTMAPDLKSITFDIRDGVKWSDGQPFTADDVVFSFDM
VKKHPEMDSVGIYKWISKAEKVGPNKVKFDLVEVNTAVANEIVKVPVVAKHVWEKVKDPV
TFTNENPVGTGPYTQIETFTPQLYVQCENPNYWQKDQVKVDCLRMPQIANNDQLLAKIVN
SELDWTSSFIPDIDRTYAAASPNHKYWYTPAGTTAFVLNYTSPNAAVNEAINNVDFRRAF
SMALDRQAIIDIAAYGNGVVNDYASGIGPAFKNWASEDTHNKYKPFMTHDVKGAKELLAK
AGFKDTNGDGFVETPSGKKLELTVISPNGWTDFNNVVQLGVEQLADVGIKAKAATPEFAV
LNTKMAKGDYDAAFTNYFHGPTPFKYFDTAFNSKYQGGEQFGRFAMHHYKDAELDKLLDS
FNKTADKKEQHEIMNKIQERIASQQITIPVYSGVEFFQYNTKRFDGWFNEKNPVARPQIW
NGYPERLLQVLSLTPKQS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggaagactaaaattgcggtagcactgttagcagcagtcacatctggcctctcc
gcaactgcaactgttgcggcagaaaaatcaatggtaaccattgtgcctgattttttcacc
gcgtttgttagaaactttaacccgtacctgaacacctcactgcgtaccactaatgacttc
atctatgaaccattagtcgtattcaacgaaatgaaaggcaacgagccggtattccgtctg
gccactggttttaccatggcaccggatctgaagagcatcactttcgacatccgtgatggc
gtgaaatggtctgatggacaaccattcactgctgatgacgtcgtgttctctttcgacatg
gtcaaaaagcacccagaaatggattccgtaggtatctacaagtggatctctaaagcagag
aaagttggcccgaacaaggtcaagtttgatctggtagaagtgaacactgcggttgccaac
gaaatcgttaaggttccagtcgttgctaagcacgtatgggaaaaagtcaaagatccagtg
actttcaccaacgaaaaccctgtcggtaccggtccttatacccagatcgagactttcact
ccgcaactgtacgtacagtgtgaaaacccgaactactggcaaaaagaccaggttaaagtt
gactgtctgcgcatgccgcaaatcgccaacaacgatcagctgctggctaagatcgttaac
agcgagctggactggacgtcttccttcattcctgacatcgaccgtacttatgctgcggca
tcaccaaaccacaagtactggtataccccagcaggtactactgcattcgttctgaactac
accagcccgaacgcggcagtgaacgaagccattaacaacgttgacttccgccgcgccttc
tccatggctctggatcgtcaagctatcatcgacatcgcggcctacggtaacggtgtggtg
aacgactacgcttccggtattggtccagcattcaaaaactgggcaagcgaagatactcac
aacaagtacaagccattcatgacgcacgacgtgaaaggcgctaaagagctgctggcgaaa
gcaggctttaaagatactaacggtgacggcttcgtagaaaccccaagcggtaagaaactg
gaactgaccgtaatcagcccgaacggctggactgacttcaacaacgtagtacagctgggt
gtagaacaactggctgacgtcggtatcaaagcgaaagcggccactcctgaatttgctgtc
ctgaacaccaagatggcgaaaggtgactacgatgcagcgttcaccaactacttccacggt
ccaacaccgttcaagtatttcgataccgcgttcaactcgaagtaccaaggtggcgagcag
ttcggtcgcttcgctatgcaccactacaaagatgctgagctggacaaactgctggactct
ttcaacaagaccgcagacaagaaagaacagcatgagatcatgaataagatccaagagcgc
atcgcgtctcagcagatcactattccggtctacagtggcgtagagttcttccagtacaac
accaagcgtttcgacggctggtttaacgagaagaacccggttgcccgtccacaaatctgg
aacggctacccagagcgtttactgcaagtactgtctctgactcctaagcagtcttaa
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