Plesiomonas shigelloides: SAMEA2665130_0508
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Entry
SAMEA2665130_0508 CDS
T04378
Symbol
rsmC
Name
(GenBank) Ribosomal RNA small subunit methyltransferase C
KO
K00564
16S rRNA (guanine1207-N2)-methyltransferase [EC:
2.1.1.172
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshi03009
]
SAMEA2665130_0508 (rsmC)
Enzymes [BR:
pshi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.172 16S rRNA (guanine1207-N2)-methyltransferase
SAMEA2665130_0508 (rsmC)
Ribosome biogenesis [BR:
pshi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SAMEA2665130_0508 (rsmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTS
MTS_N
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_10
Methyltransf_11
PrmA
Methyltransf_23
Methyltransf_16
NodS
Methyltransf_18
CMAS
Methyltransf_2
UPF0020
TehB
GidB
Cons_hypoth95
DUF938
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
SBT60075
LinkDB
All DBs
Position
1:complement(558747..559769)
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AA seq
340 aa
AA seq
DB search
MLCAASEVLQRHEDEFASRHVLFAGDLQDDYCLHMPAASRRVHTAHYARFLSLHPRLGDA
ISYGIMADAKWVEGTDTLIYYWPKTKQEALMQLSQLCSVLPAGCDIFIVGENRVGVRSAE
SLLSAYGNAHKIDSARRCGLYHLHLTAQAPFSLDQWWHSYALDSLTIHALTGVFSSGELD
TGTRLLLSTLSESRQGRALDVGCGAGVIGAHLAQQSPSLQVTLSDINAMAVESARVTLAN
NQLTGTVLASDVFSDISERFDLIVSNPPFHDGADTCYRATELLIREAPQHLLPGGELRIV
ANAFLPYPDLLDSVFGAHEVLAVTGRFKVYRAVLTRNAGK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgctgccagtgaagttctgcaacgtcatgaagatgaatttgcctcccgccat
gtgctgtttgccggcgatctgcaggatgactattgcctgcatatgcctgcggcatcccgc
cgtgtgcataccgctcactatgctcgcttcctgagcctgcacccacgtctgggcgatgcc
atcagctatggcattatggcagatgccaaatgggtggagggtaccgataccctcatctat
tactggccaaaaaccaaacaagaagcgctgatgcaactcagccagctgtgcagtgtcctg
cctgccggttgcgatatctttattgtgggggaaaatcgggttggcgtacgctcagcggaa
agcctgctcagcgcctatggcaatgcccacaaaattgactcggcccgccgctgtggcctg
taccacctgcacctgaccgcgcaagcgccattctcgttagatcaatggtggcacagttat
gcgctggattcgctgaccattcacgccctgacaggcgtctttagcagtggtgagctggat
accggtacgcgtctgctgctctccaccttaagcgaatcgcgccaaggccgtgcactggat
gtgggctgcggggcgggcgtgatcggcgcacatctggcgcagcaatcgccaagcctgcag
gtcaccctgagcgatatcaatgccatggcggtagaatccgcgcgcgtgacgctggccaat
aaccagctcaccggcacagttctggccagcgatgtgttctccgatatcagcgaacgcttt
gatctgattgtctccaacccaccgttccatgatggtgccgatacctgctatcgcgcgaca
gagctcttgatccgcgaagcgccacagcacctgctgccaggcggagagctgcgaattgtt
gccaacgcatttttgccttatccggacctgctcgatagcgtatttggtgcccacgaagtg
ctggccgtcaccggtcgtttcaaagtttaccgcgccgttttaacgcgaaacgcgggcaaa
tga
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