Plesiomonas shigelloides: SAMEA2665130_0523
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Entry
SAMEA2665130_0523 CDS
T04378
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_0523
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAMEA2665130_0523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
RecA_N
SLFN-g3_helicase
AAA
AAA_22
nSTAND_NTPase5
AAA_24
ABC_tran
GvpD_P-loop
AAA_14
Rad51
Zeta_toxin
AAA_16
Viral_helicase1
NTPase_1
nSTAND3
AAA_5
AAA_29
cobW
DZR
Motif
Other DBs
NCBI-ProteinID:
SBT60090
LinkDB
All DBs
Position
1:576639..578018
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AA seq
459 aa
AA seq
DB search
MAKAAKRAFVCNECGADYPRWQGQCSACQAWNTITEVRLASAAGSRNERLSGYAGHAGSS
KVQTLAEISLQELPRFSSGFKEFDRVLGGGVVPGSAILIGGSPGAGKSTLLLQTMCRLAL
QMNTLYVTGEESLQQVAMRAHRLGLPTDKLKMLSETSVEQICLIAEQEQPQIMVIDSIQV
MHMADVQSAPGSVAQVRETAAFLTRFAKTKQVAIIMVGHVTKDGSLAGPKVLEHCIDCSV
LLDGDTDSRFRMLRSHKNRFGAVNELGVFAMTEQGMREVSNPSAIFLSRGEEEAPGSSVM
VVWEGTRPLLVEIQALVDHSMLGNPRRVAVGLDQNRLSLLLAVLHRHGGLQMADQDVFVN
VVGGVKVTETSADLALLLAMVSSLRDRPLPRDLVIFGEVGLAGEIRPVPSGQERITEAAK
HGFKRAIVPIANMPKQPPVGMQVFGVKKLSDALDVFNEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagcagcaaaacgtgcctttgtgtgcaatgagtgcggcgcggattatccgcgc
tggcaggggcagtgcagtgcctgtcaggcttggaataccattacggaagtgcgtttggcc
agcgcggccggcagtcgtaacgaacgcttgagcggctatgctggtcatgcaggcagcagc
aaggtgcaaactctcgccgagattagtctacaggaactgcctcgcttttcctccggtttt
aaggagtttgatcgggttctgggcggcggcgtggtgcccggcagtgccattttgattggt
ggcagccctggtgcggggaaaagtactctgctgttgcagaccatgtgccgtttggcgctg
cagatgaacaccctgtatgtgacaggggaagagtcactgcagcaggtggcgatgcgggcg
caccgtttgggattgccgaccgataaattgaaaatgctgtcggaaaccagtgtcgagcaa
atctgcctgattgccgagcaagagcagccgcagatcatggtgatcgactcaattcaggtg
atgcacatggccgatgtgcaatcggcgcccggcagtgtggcgcaggtgcgggaaacggcg
gcgttcctgacgcgctttgccaaaaccaagcaagtggccatcatcatggtcggtcacgtg
accaaagatggttcgctggctggcccgaaagtgctggagcactgcattgactgctccgtg
ttactggatggcgataccgattcgcgttttcgtatgctgcgcagccacaaaaaccgtttt
ggcgccgtcaatgaactgggcgtgttcgccatgaccgagcaagggatgcgtgaggtgagt
aatccgtcggcgattttcctgagtcgcggtgaagaagaagcgcccggcagctccgtgatg
gtggtgtgggaagggacgcgtccgctgctggtggagattcaggcgctggtggatcactcg
atgctgggcaatccacgtcgggtggcggtagggctggatcagaaccgtttatctttattg
ttggcggtattgcaccggcatggcgggttgcaaatggccgatcaggatgtgtttgtcaac
gtggtgggcggagtgaaagtcaccgagaccagcgccgatttggcgttgctgttggcgatg
gtgtccagcttacgtgatcgtccgttaccgcgtgatttggtgatttttggcgaagttggg
ctggccggcgagatccgtccggtgcccagtggccaagagcgaatcaccgaagcggccaaa
catggctttaaacgggcgatagtgccaattgccaatatgccaaaacaaccgccggtcggt
atgcaggtgttcggggtgaaaaaactgtccgatgcgttggatgtgtttaacgagctgtaa
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