Plesiomonas shigelloides: SAMEA2665130_0598
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Entry
SAMEA2665130_0598 CDS
T04378
Symbol
glyA
Name
(GenBank) Pyridoxal-phosphate-dependent serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00260
Glycine, serine and threonine metabolism
pshi00460
Cyanoamino acid metabolism
pshi00630
Glyoxylate and dicarboxylate metabolism
pshi00670
One carbon pool by folate
pshi00680
Methane metabolism
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01120
Microbial metabolism in diverse environments
pshi01200
Carbon metabolism
pshi01230
Biosynthesis of amino acids
pshi01240
Biosynthesis of cofactors
pshi04981
Folate transport and metabolism
Module
pshi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SAMEA2665130_0598 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SAMEA2665130_0598 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMEA2665130_0598 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SAMEA2665130_0598 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SAMEA2665130_0598 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SAMEA2665130_0598 (glyA)
Enzymes [BR:
pshi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SAMEA2665130_0598 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
SBT60160
LinkDB
All DBs
Position
1:655139..656392
Genome browser
AA seq
417 aa
AA seq
DB search
MLKRDMNIADYDADLWQAMQQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIVPYGIDEHGRIDYDDVARQAQEHKPKMIIGGFSAYSRL
VDWARLREIADSVGAYLFVDMAHVAGLVAAGAYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SAAGDEDLYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKALQFQIVRNAQAMVD
VFQKRGYKVVSNGTENHLFLLDLIDKDITGKDADAALGRANITVNKNSVPNDPRSPFVTS
GIRIGSPAISRRGFKEEEAALLAGWMCDVLDDINNEATIERVKGQVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacgagacatgaacattgccgactacgatgctgacttatggcaggccatgcag
caggaagttgtgcgtcaggaagagcatattgagctgattgcgtcagagaactataccagc
ccgcgcgttatgcaggcccagggctcccagctgaccaacaaatacgcggaaggctatccg
ggcaagcgctactacggcggttgtgagtatgtggatattgttgagcagttggctattgat
cgcgcgaaggcgctgtttggtgccgattacgctaacgtgcagccacactccggttcacaa
gctaactctgcggtgtatatggcgctgctaaacccgggcgataccgttctgggcatgagc
ttggcgcatggtggccacctgactcacggttcaccggttaacttctccggtaaactgtac
aacatcgtgccttacggcatcgatgagcacggtcgcattgattatgatgatgtggcgcgt
caggcccaagagcataagccgaagatgatcatcggtggtttctctgcctactctcgtctg
gtggattgggcgcgtctgcgtgaaattgctgacagcgtcggggcttatctgtttgtggat
atggcgcacgttgcaggcttagtggctgccggtgcctatccaaatccagtgcctcacgct
cacgtggtgacgactaccacgcacaagactctggccggtcctcgtggtggcttgattttg
tcggctgccggtgatgaagatctgtataagaagctgaactctgccgtgttccctggtggc
caaggtggcccactgatgcatgtgattgcggcaaaagccgtagcatttaaagaagctatg
gagccggagtttaaagcgctgcagttccaaatcgtgcgtaacgcacaggcgatggtggat
gtattccagaaacgcggctacaaagttgtttctaacggcactgagaaccacctgttcttg
ctggatctgattgataaagatatcactggtaaagatgcggatgcggcactgggccgagcc
aatatcaccgtgaacaaaaacagcgtgccgaacgatccacgcagtccgtttgtgacgtcg
gggatccgtattggctctccagctatttctcgtcgtggctttaaagaagaagaagcggca
ctgctggcgggttggatgtgtgatgtgctggatgacatcaacaatgaagcaaccatcgag
cgtgtgaaaggtcaggtactggatatctgtgctcgcttccctgtttacgcgtaa
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