Plesiomonas shigelloides: SAMEA2665130_0855
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Entry
SAMEA2665130_0855 CDS
T04378
Symbol
ntrC_1
Name
(GenBank) Nitrogen assimilation regulatory protein
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi02020
Two-component system
pshi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMEA2665130_0855 (ntrC_1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAMEA2665130_0855 (ntrC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_0855 (ntrC_1)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pshi02035
]
SAMEA2665130_0855 (ntrC_1)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
Other families
SAMEA2665130_0855 (ntrC_1)
Bacterial motility proteins [BR:
pshi02035
]
Flagellar system
Flagellar assembly proteins
Others
SAMEA2665130_0855 (ntrC_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
bpMoxR
AAA_7
MCM
AAA
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
SBT60393
LinkDB
All DBs
Position
1:948278..949807
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AA seq
509 aa
AA seq
DB search
MPGLQKFLLIEDEPHRREVLTVIFNFIGQENIVVSSRDVELSLEEKHSWAGCLLGRITST
DSQYQAVIDFLRINHHIPVITFAGQGEDLQGLANYVGEVAEPLNYVQLTEALGHCYEFQG
KHSASYPQITRKNSLFRSLVGRSHAVQNVRRMIEQVAPTDANVLILGESGTGKEVVARNI
HYYSARREGPFVPLNCGAIPAELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEI
GDMPMSMQVKLLRVLQERCFERVGSNKTIRADVRVIAATHRNLEEMIANGEFRQDLYYRL
NVFPIDVPALRERAEDIPLLLQELLSRLTAEGARSVHFTPRALHSLCEYSWSGNVRELAN
LVERLVILYPDELIDICHLPPKYRSVEVSSFQPNTTPAVQDLSALHGYPRSHEDEQTELE
RAALSEIFNEAVPATGASQSEGPSTLGALPPEGMNLKEMLSDLEIGLIRQALDAQFWVVA
RAADMLGMRRTTLVEKMRKYGLNKESAAV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgccgggactgcaaaaatttttactgatagaagatgagcctcaccgccgtgaggttctg
acggttatttttaactttataggtcaggaaaatatcgttgtttcatccagagatgtagag
ctgtctctggaggaaaagcattcctgggcaggctgtttgctcggccgtatcacaagtacg
gattctcagtatcaagcagtgattgattttctgcgtatcaatcatcatatccctgtgatt
acgtttgctgggcagggcgaggatttacaagggcttgctaactatgttggcgaagtggct
gagcctctcaactacgttcagttaaccgaagcgctggggcactgttacgaatttcaaggt
aagcactcggcttcttatccgcaaattacccgtaaaaacagtctattccgtagcctggta
gggcgcagccatgcggtgcaaaatgtgcgccgtatgattgagcaagtagcgcctactgac
gctaacgtgctgattttaggtgagtctggtaccggtaaagaggtggtggcacgtaatatc
cactattactctgctcgtcgagaagggccttttgttccgttaaactgcggcgctattcca
gccgaattgttggaaagtgagctgtttgggcacgaaaaaggtgcgtttaccggtgccatt
tctgcgcgtaaaggccgttttgaactggctgaaggcggtacactgttcttggatgaaatc
ggcgatatgccgatgtccatgcaggtgaagctgctgcgtgtattgcaagagcgttgcttt
gagcgtgtggggagcaataagaccatccgcgcggatgtgcgagtgattgcggcaacacac
cgtaacttggaagagatgattgccaatggtgagtttcgccaagacttgtactaccgtctg
aatgtattcccgattgatgtcccagcactgcgtgagcgggccgaggatattcctttgcta
ttgcaagagttgctatcgcgtttaactgccgaaggtgctcgctccgttcactttactccg
cgagcgctgcactcactgtgcgagtactcttggtcgggtaatgtgcgtgagttggcgaat
ttggtggagcgcttagttattttgtatccggatgagctgattgatatctgccatttgcca
ccgaaataccgcagtgttgaggtatcgagcttccagccgaataccacaccagccgtgcag
gacttgtctgcattacacggttatccgcgtagccatgaagatgaacaaaccgagctagag
cgtgccgcactgtctgagatcttcaacgaggcggtgccagccacaggggctagccagtca
gaaggaccgtctactttgggtgcgttaccgccggaaggaatgaacctcaaagagatgctc
tctgatttggagattggattgattcgtcaagcgctggatgctcagttctgggttgtagcc
cgtgccgcagacatgctgggtatgcgccgtacaacattggttgaaaaaatgcgtaagtac
ggattgaacaaggaaagcgctgcagtttga
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