Plesiomonas shigelloides: SAMEA2665130_0902
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Entry
SAMEA2665130_0902 CDS
T04378
Symbol
fadJ
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00071
Fatty acid degradation
pshi00280
Valine, leucine and isoleucine degradation
pshi00310
Lysine degradation
pshi00362
Benzoate degradation
pshi00380
Tryptophan metabolism
pshi00410
beta-Alanine metabolism
pshi00640
Propanoate metabolism
pshi00650
Butanoate metabolism
pshi00907
Pinene, camphor and geraniol degradation
pshi00930
Caprolactam degradation
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi01120
Microbial metabolism in diverse environments
pshi01200
Carbon metabolism
pshi01212
Fatty acid metabolism
Module
pshi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SAMEA2665130_0902 (fadJ)
00650 Butanoate metabolism
SAMEA2665130_0902 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
SAMEA2665130_0902 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SAMEA2665130_0902 (fadJ)
00310 Lysine degradation
SAMEA2665130_0902 (fadJ)
00380 Tryptophan metabolism
SAMEA2665130_0902 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SAMEA2665130_0902 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SAMEA2665130_0902 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SAMEA2665130_0902 (fadJ)
00930 Caprolactam degradation
SAMEA2665130_0902 (fadJ)
Enzymes [BR:
pshi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SAMEA2665130_0902 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SAMEA2665130_0902 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SAMEA2665130_0902 (fadJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
SBT60440
LinkDB
All DBs
Position
1:1006302..1008431
Genome browser
AA seq
709 aa
AA seq
DB search
MTTQSAFSLTVRDDGVGVLTMDVPGDSVNTLKAEFGEQIRAILSELKNRNDVRGLVLISG
KTDSFVAGADISMLAACRSADEAATLSRQGHAVMAELEALPFTVVAAIHGACLGGGLELA
LACHARVCTEHDKTQLGLPEVQLGLLPGSGGTQRLPRLIGVAKALDLMLTGRSVRAKSAR
KMGLVDDVVPPSILLQAAAELALQPKPKRSKPGGAMGWLLEGNSAGRNLVFNQATKQTLS
KTRGNYPAPEKILDVVRCGLEKGVAAGLEAEAREFGELVMTQESAALRSIFFATTEMKKE
REAGATPLPLKSIGVLGGGLMGGGIAFVTASKAGLPVRIKDVASAGINHALRYSYDILNK
RVKKKILLPAQMQKQMLMLSGGLDYTAFAERDLVVEAVFEDLKLKQKMVADVEQYCRVDT
VFASNTSSLPIGQIAAQAQRPENVIGLHYFSPVDKMPLVEVIPHAGTSAQTIATTVEFAR
KQGKTPVVVADQAGFYVNRILAPYMNEAARCLLAGDSIEHIDAALMDFGFPVGPITLLDE
VGIDVGAKISPILQEALGERFAAPDAFSALLKDDRKGRKNGRGFYLYGKKMRKGKKLPDT
SVYKVLGVQPSSNQEPQELAERCVLMMLNEAARCLDEGIIRSPRDGDIGAIFGIGFPPFL
GGPFRYMDRIGAAQLTTRLQEHAKRFGQRFEPCERLLQMAQGNEKFYSE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgactacacaaagcgcattttccttaacggtcagggatgacggggtcggcgtactgacc
atggatgttcctggcgatagtgttaacaccttgaaagccgagtttggcgaacagatccgc
gcgatcttatccgaactgaaaaatcgtaatgatgttcgcggtctggtgctaatttccggc
aaaaccgactcttttgtcgccggagcggatatcagcatgttggccgcctgccgtagcgcc
gatgaagcggcaactttatcgcgccaagggcatgcggtgatggctgagctagaagcactg
ccgtttaccgtggtggcggcgattcatggcgcttgcttaggcggggggctagagttggcg
ctggcttgccacgctcgcgtgtgtaccgagcatgataaaacccaactagggttaccggaa
gtgcagctcggtctgttgcctggctctggtggaacgcagcgtctgccgcgtctgattggc
gttgccaaggccttagatttgatgctgactgggcgcagtgtacgggcaaaatcagcgcgt
aaaatggggctggtggatgatgtggttccgccgagtattttactgcaggccgccgcagag
ttggcgttgcaaccgaaaccgaaacgcagtaaaccgggcggtgcgatgggctggttgctg
gaaggcaacagcgcggggcgtaatctggtgttcaatcaggcgaccaagcaaactttaagt
aaaacccgtggcaattatcccgcgcctgagaagattttggatgtggtgcgttgtggttta
gaaaagggcgtggccgccggtttagaggccgaagcgcgtgagttcggtgagctggtaatg
acccaagagtctgccgcactgcgctcgattttctttgccaccaccgagatgaaaaaagag
cgtgaagcgggcgctacgccgctgccactcaagagtattggtgtattaggcggcggcttg
atgggcggcgggattgcctttgtgaccgccagcaaagccgggttaccggtgcgcattaaa
gatgtggccagtgcggggattaaccacgcgctgcgctacagctacgatatcttgaacaaa
cgggtgaagaagaaaatcctgctgcctgcgcagatgcaaaaacagatgctgatgctctcc
ggcgggctggattacactgcgtttgccgaacgcgatctggtggtcgaagctgtgtttgag
gatttgaaactcaaacaaaagatggtggcggatgttgaacaatattgccgagtcgatacc
gtgtttgcctccaatacctcctcattgccgattggtcagattgcggcgcaggcgcagcga
cctgaaaatgtgatcgggctgcattattttagtccagtcgataaaatgccgttggtggaa
gtgatcccgcatgccggcacgtcggcgcagaccatcgcaaccacggtcgaatttgcgcgt
aagcagggcaaaacccccgtcgtggtggcggatcaggccggtttttatgttaaccggatt
ctggctccgtacatgaatgaggcggcgcgctgcctgttggccggtgatagtatcgagcat
attgatgccgcgctgatggattttggcttccctgtaggcccgattacgttgctggatgaa
gtgggcattgatgtcggcgctaagatttcgcctattttgcaagaagcgctcggtgagcgt
tttgctgcgcctgacgcctttagcgccctgctcaaagatgatcgtaaagggcgtaaaaat
gggcgcggtttttacctgtacggcaaaaaaatgcgtaaagggaagaagctgccggatacc
tccgtgtacaaggtcctgggtgtacagccgagttccaaccaagagccacaagaattggcc
gaacgctgtgtgctaatgatgcttaatgaagcagcgcgctgtttagatgaagggattatc
cgcagcccacgcgatggggatattggggcgattttcgggattggtttccctccgttctta
ggcggcccgttccgttacatggatcgcatcggcgctgcacagctgacaacccgtctgcag
gaacatgcgaaacggtttggccaacgctttgaaccttgtgagcgcttgttgcagatggcg
caggggaatgagaaattctattcagaataa
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