KEGG   Plesiomonas shigelloides: SAMEA2665130_1080
Entry
SAMEA2665130_1080 CDS       T04378                                 
Symbol
helD
Name
(GenBank) Helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
pshi  Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:pshi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pshi03400]
    SAMEA2665130_1080 (helD)
Enzymes [BR:pshi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SAMEA2665130_1080 (helD)
DNA repair and recombination proteins [BR:pshi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SAMEA2665130_1080 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_30 AAA_19 AAA_22 UvrD_C_2 ResIII PhoH DEAD UvrD_C NPHP3_N SLFN-g3_helicase nSTAND3
Other DBs
NCBI-ProteinID: SBT60613
LinkDB
Position
1:1225937..1228114
AA seq 725 aa
MKLTATRLGRRLSQHPFHTVEVVNDALCFSRGMLTDERRHQLRNESHRDAQSRSEQLIVP
FRQLLAIEIRRGIVWGELQVALAEGETITLHGTDWNATRAFCAELESRWQQWTQEMLPLV
LQALAQAGGPLISRLKALRWLANDELQQLQQTILQAWQALPIAPQRVACLEACAEPFSFC
QRWLDEGEELTRRYNQQFIQRLRQQEFDLFGGCLPPAAQPTESQLEALLLNEPRVLVQGI
AGSGKTHIAAARAAWLMQQEGAQASQILLLAGAPASREQMLQVLRATLGQDAELPAIWLM
HELGAHIVAQADSRKLSELNALETDHTARCAFWIAQWQNQCSEKAAQAKGWAQWLGEELG
WPLAEEVFWQDPVLCARLSVRLDRWLMLLRRQAGSQKSWLESQVDEEMQPALQKKLRLLN
PLLKAWRTHLKEARTQDSLTLEQQAQDLLAAGRYVSLFTHIICDDAQLLSPRQLDLLQPL
VTHRQTRFYALGDDWQRITRYVGDGTSLRRDVAARFGEPYCITLDTDFRQPAAAVAVNQR
LAQQHPDYRDIEWHGANSDTPNNASKHPVRILPEGELEPLLDLLSGVLQPTQSVVISGRS
AIQRPACVDYAARRWPRLSLRYIPLNELIGIECEHLILTGLQGGSEGFPAPVRETLVEQA
LLPLAAYFPDAEERRLLYLALTRARAKTWLLAADSTDYSAEHSVEPSRFLARLREADVPF
YRRAQ
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgaaactgactgccacccgcctcggacgccgactttcgcagcacccttttcacaccgtt
gaagtggtgaatgacgccctgtgctttagccgcggtatgctcaccgatgagcgccgtcat
caacttcgcaatgaatcgcatcgcgatgctcaatctcgcagtgaacagttaatcgtcccg
tttcggcagctgctcgctatagaaatacgccgtggcattgtgtggggcgagttgcaagta
gcgttggcagagggcgaaacgatcaccttgcatggcaccgattggaatgccacccgcgca
ttttgtgccgagttggaaagccgctggcagcagtggacacaagagatgctaccactggtg
ttgcaagcgctggcgcaagctggggggccactgatcagccgcctcaaagcgttgcgctgg
ttggccaacgatgaactgcaacagctgcagcagacgattttgcaagcatggcaagcatta
ccgatagccccacagcgcgtagcctgtttggaggcatgtgcggagccctttagcttctgc
caacgttggttggatgaaggcgaagagctgacgcgacgttacaaccagcagtttatccaa
cgtctgcgtcagcaagagtttgatttgtttggtggttgcttgccgccagccgcgcagccg
acggaatcgcaattagaggctttgctccttaacgaacctcgggttctggtgcagggcatt
gccggcagcggaaaaacccatattgccgctgcgcgcgccgcatggctgatgcaacaagag
ggcgcgcaagcgtcgcagattttgctgttagccggcgctcccgctagccgcgagcaaatg
ttgcaggtgctgcgcgctacactgggccaagacgcggagttacccgcgatatggctgatg
catgaattgggcgcgcatattgtggcgcaggccgatagccgtaagctaagcgagctcaat
gcgttagaaacagatcacacagcgcgctgcgcattctggattgcgcagtggcaaaaccag
tgcagtgagaaggccgcgcaagccaaaggttgggcgcagtggttaggcgaagagttgggc
tggccattagcggaggaggtattctggcaagatcctgtgctatgcgcgcgattaagcgtt
cgtctcgatcgttggttgatgttgctgcgtcggcaggcgggcagtcagaaaagttggctt
gagtcgcaggtggatgaagagatgcagccagcactgcagaaaaaactgcggctactgaat
ccgctgttaaaagcgtggcgcactcacctcaaagaggcgcgtacccaagatagtctgacg
ctagagcagcaagcgcaagacttgctggcggcaggccgctatgtcagtttgtttacccac
attatttgcgacgatgcgcagctcttgtcaccgcggcaactggacttgctgcaaccgttg
gtcacgcatcgacagactcgtttctacgcccttggcgatgattggcagcgcatcacccgt
tatgttggcgatggcacttcgctgcgccgcgatgttgctgcccgttttggtgagccgtat
tgcatcacgcttgataccgattttcgccagcctgctgcggcagtggcggtgaatcagcgt
ttagcgcagcagcacccagattatcgggatatcgagtggcatggtgccaacagtgataca
cctaataatgcgagcaaacacccagtgcgcattttaccggaaggtgaattagagccactg
ttggatttactctccggcgtgttgcagccaacgcaatccgtggtcattagcggccgctca
gctatacagcgaccggcttgtgtggactacgcggcgcggcgctggccacgcctgtcttta
cgctatatcccgctgaatgagttgataggcatcgagtgcgagcacctcattttgacgggt
ttgcagggcggcagtgagggctttccggcacccgtgcgggaaacgctggtcgagcaggca
ctgttaccgctcgccgcatattttcctgatgccgaagagcgacgcttattgtatttggcg
ctaactcgggcgcgggcgaaaacctggctgttagccgccgattccactgattactcggcg
gagcatagcgttgaaccttcgcggtttttggcgcgcttgcgcgaagctgacgtcccgttt
tatcggcgagcacaataa

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