Plesiomonas shigelloides: SAMEA2665130_1249
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Entry
SAMEA2665130_1249 CDS
T04378
Symbol
ompC_2
Name
(GenBank) Porin ompk36
KO
K09476
outer membrane pore protein F
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi01501
beta-Lactam resistance
pshi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMEA2665130_1249 (ompC_2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMEA2665130_1249 (ompC_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshi02000
]
SAMEA2665130_1249 (ompC_2)
01504 Antimicrobial resistance genes [BR:
pshi01504
]
SAMEA2665130_1249 (ompC_2)
Transporters [BR:
pshi02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMEA2665130_1249 (ompC_2)
Antimicrobial resistance genes [BR:
pshi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, repression of porin OmpF [MD:
M00746
]
SAMEA2665130_1249 (ompC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
LTD
Motif
Other DBs
NCBI-ProteinID:
SBT60774
LinkDB
All DBs
Position
1:complement(1409897..1411012)
Genome browser
AA seq
371 aa
AA seq
DB search
MKYNSLAVVLPALLLSSTSYAVELYNKDGNTIDFYGYVMGDYHFSKKNDISTHGDQSNSR
FGIKGTTEINPELKGFGHFEYNQPINNNENSFWGEEGEVRLGYAGLTHDTYGTIQYGHNW
SVMYDVTQYADMLPEFGEDTLGYFSEVSGSTVIDPDSMFGSGRGNGMLQYRYSYAGFDMG
LQYLASSTGVQGEGAGASLQYTFDSVGITLGGAYNAGSKDMQAIRNLGAPLASDFNESRA
HMWALGAKYDLNNIYLSAVYAETDNQQPYVDINNNNNFADKTQAYFLTAQYTFDMGLTPG
IAYAQGKAKSLNGYGDQDYSKYVDLSLNYAINNHFTTYVDYKINLLDNNEYTRQNSVLTD
DVVAVAFQYNF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaattctcttgccgtagttttacctgctcttttactatcgtccaccagctat
gctgttgaactgtataacaaagatgggaataccattgatttctatgggtatgtcatgggg
gattaccacttctccaagaaaaatgacatttccacacacggggatcagagtaactctcgc
tttggtatcaaaggcacaacagaaattaatcctgaattgaaaggctttggtcattttgaa
tataaccagccaatcaataataacgaaaactcattttggggcgaagaaggtgaagttcgc
ttaggctatgccggcttaacccatgatacctatggcaccattcaatacggtcataactgg
tctgtgatgtatgacgtgacccagtatgccgatatgctgccagaatttggtgaagatacg
ttgggttacttctccgaagtctcaggcagtaccgtgatagatccagattcgatgttcggt
tcaggccgtggtaacggtatgctgcaataccgctacagctatgctggctttgatatgggt
ctgcaatatctggctagcagtaccggcgtacagggcgaaggtgccggtgcctcattgcaa
tataccttcgattcggtcggcatcaccttaggtggtgcatataacgccggtagcaaagat
atgcaggccattcgtaatctcggtgctccactggcgtcagacttcaacgaaagccgcgcg
catatgtgggctctgggcgcaaaatacgatcttaacaacatctatctgtcagcggtgtat
gccgaaaccgacaatcagcaaccgtatgttgatatcaacaataacaacaactttgctgac
aaaacacaagcctatttcttgaccgcgcaatacaccttcgacatgggcctgaccccaggt
attgcctatgcgcaaggtaaagcgaaaagcttaaacggttatggcgatcaggattacagt
aaatatgtcgacttatcgttgaactacgcgatcaataaccacttcaccacctatgtggat
tacaaaatcaatctgctcgacaacaacgaatacactcgtcaaaacagtgtgctcaccgat
gatgtggtcgccgttgcgttccagtacaacttctga
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