Plesiomonas shigelloides: SAMEA2665130_1262
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Entry
SAMEA2665130_1262 CDS
T04378
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00061
Fatty acid biosynthesis
pshi00071
Fatty acid degradation
pshi01100
Metabolic pathways
pshi01212
Fatty acid metabolism
pshi02024
Quorum sensing
pshi04146
Peroxisome
Module
pshi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SAMEA2665130_1262
00071 Fatty acid degradation
SAMEA2665130_1262
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SAMEA2665130_1262
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA2665130_1262
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pshi01004
]
SAMEA2665130_1262
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshi04147
]
SAMEA2665130_1262
Enzymes [BR:
pshi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SAMEA2665130_1262
Lipid biosynthesis proteins [BR:
pshi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SAMEA2665130_1262
Exosome [BR:
pshi04147
]
Exosomal proteins
Exosomal proteins of breast milk
SAMEA2665130_1262
Exosomal proteins of breast cancer cells
SAMEA2665130_1262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
S-Me-THD_C
Motif
Other DBs
NCBI-ProteinID:
SBT60787
UniProt:
A0A379CM89
LinkDB
All DBs
Position
1:1426600..1428246
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AA seq
548 aa
AA seq
DB search
MSIIRKQPLEMLYYWESHRPDETYLRQPVNRHFNCYSWKEVARQARVIASALRGLGLAPG
DRVALLSKNCAEWFIADFAMMMGGFVSVPIYPTANSETIRYVLEHSESKAIFIGKLDHPE
NVEAVLPPDILRIAFPYPTAPCQYQWQALLNDFLPLEESPIPEPESLMSLVYTSGSTGRP
KAVMHSHERFGWAAKSVAQTVQLGPNDRGFSYLPLSHITERVYILGGSLYGGCTISFPES
LDTFVDDIKATAPTIFISVPRLWSAFRSRILEKMPEEKLERLLSIPLVNNLIKYVIQRKL
GLHRARVLGCGSAPVAPSLLHWYHRLGMNITEAWGMTENLAYGTINYPFRADKIGSIGHA
SKGVEVMLSEEGEIMTRSPGTMLGYYLDDISTALAIKDEWLYTGDLGEIDAQGYVRITGR
LKDIFKTEKGKYVSPVVLEAKLASLEIIEQLCVIGSGLPQPVGLVQLSASSLALPREMLA
KALTEHLESVNAQLEPHEVLSGIAVISEPWTIDSGDLTPTLKLRRHKVEQRYNEAVRQWS
KGEKVRWL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcatcagaaaacaaccgctggaaatgctctactactgggaatcgcatcgtcca
gatgaaacctatctgcgccagccggttaatcgtcattttaattgctactcgtggaaagaa
gtggcacgtcaagcgcgggtgattgccagcgcactgcgtggcttggggcttgcaccgggc
gatcgggtagctttgctctcgaaaaactgtgccgaatggtttattgccgatttcgccatg
atgatgggcgggtttgtcagtgttcctatctatccaacggcgaacagcgaaaccattcgc
tatgtgctggagcactccgagagtaaagccatttttatcggcaaattagatcatccagaa
aatgtcgaagcggtattgccgccggacattttacgtatcgctttcccgtatccgaccgcg
ccttgccagtatcagtggcaagcgctacttaatgatttcctgccactggaagaaagtccg
atccctgagccggaaagcttgatgtcactggtgtatacctctggcagtaccggtcggcct
aaggcggtgatgcacagccacgagcgctttggctgggcggctaaatcggtggcgcaaacc
gtgcaattaggcccgaatgatcgcggtttttcttatctgccgctgtctcacatcactgag
cgggtgtatatcctcggtggcagcttatatggcggttgtacgatttcgttccctgagtcg
ctagatacgtttgttgacgacatcaaggccacggcaccaactatctttatctctgtaccg
cggctgtggtcagcatttcgttcgcgcatcttggaaaaaatgccggaagagaagttggag
cgtctgctgtctattccgctggtcaataacctgattaagtacgtcatccaacgcaaatta
ggcttgcaccgcgcccgcgtgttgggctgcggctccgcgccggttgcgccatcgcttctg
cattggtatcaccgtttggggatgaatatcaccgaagcgtgggggatgacggaaaactta
gcctacggcaccatcaattatccattccgcgccgataaaattggctcaattggccatgcc
tcgaaaggggtggaagtgatgttgtcggaggaaggcgagatcatgacccgcagccccggc
accatgttgggctattatctggatgacatctcaaccgctttggcgattaaagatgagtgg
ctgtataccggcgatctgggcgaaattgatgcgcaaggctatgtgcgaattaccggtcgc
ttgaaagacatctttaaaaccgaaaaaggcaaatatgtctcgccggtggtgttggaagct
aaactggcttcgttggagattattgagcagttgtgtgtgattggcagcggcttaccgcag
ccggtgggcttggtgcaactgtcagccagttcgctggcgctgccgcgggaaatgttagcc
aaagcgttgaccgaacatctagaaagcgtgaatgcacagctcgaaccgcacgaggtattg
agcgggattgcggtgatttccgagccgtggactatcgacagtggcgatctgaccccgaca
ctgaaattacgtcggcacaaggtcgaacagcgctataacgaggcggtccgccagtggtcg
aaaggcgagaaggtgcgctggttgtaa
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