Plesiomonas shigelloides: SAMEA2665130_1286
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Entry
SAMEA2665130_1286 CDS
T04378
Symbol
cydD
Name
(GenBank) ATP-binding/permease protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA2665130_1286 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshi02000
]
SAMEA2665130_1286 (cydD)
Transporters [BR:
pshi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SAMEA2665130_1286 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
MMR_HSR1
ABC_ATPase
AAA_22
AAA_16
Chropara_Vmeth
MobB
Motif
Other DBs
NCBI-ProteinID:
SBT60811
LinkDB
All DBs
Position
1:complement(1451539..1453356)
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AA seq
605 aa
AA seq
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MDKNKQRELTRWLKQQSKLARRWQSLTMLLGVVSGLLIALQAWLLAVLLNDLIILQQPRD
SLTRYFLMLVGTVVLRAIITRLRERCAFYCGMEVRRQIRSLVLDRLEKLGPAWINGKPAG
SWASMVLEQVENMQDFFARYLPQMYLAVFIPLIVLCVVFPINWAAGVILLVTAPLIPFFM
ALVGMGAADANRRNFQALARLSGSFLDRLRGLETLRLFNRANAEVNHIRHDAEDFRERTM
EVLYMAFLSSAVLEFFTSVSIAIVAVYFGFSYLGELNFGHYSQGITLFAGFLVLILAPEF
FQPLRDLGTFYHAKAQAVGAAETLVDFLSAEAQTPAQGDKPYQARADGSAHENSQPSAEH
ASDMPHIWAQNLEILSPQGTVLAGPLDFRILAGEQIALVGRSGAGKTSLMNVLLGFLPYR
GSLKVNGQELSELDPQSWRDHLAWVGQNPRLLQGTIRDNILLGAPHASEAEVQRAAASAH
ADEFIARLPQGLDTPVSDEGAGLSVGQAQRIAVARALLRGGEFLLLDEPTASLDARSEQL
VMQALSHAAQGRTTFMITHRLEDVRNCHQIWLMDHGKLVQQGDFATLSSSDGPFAAMLAN
RNQEI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaacaaacaacgcgagctgactcgctggctaaagcagcagagtaaattggca
cgccgctggcaaagcctgaccatgctgctgggtgtggtttccggattactcatcgcatta
caggcctggttactggccgttttacttaatgacctgattatcttgcaacaaccgcgcgac
tctctgacccgctatttcctgatgctggttggcaccgtggtactacgcgcgatcatcacg
cgcttgcgcgaacgctgcgccttttactgcgggatggaagtgcgtcgccaaattcgctca
ctggtacttgaccggttggaaaaactggggccagcgtggatcaacggcaaacccgctggc
agttgggccagcatggtgctggagcaagtggaaaacatgcaggatttctttgcgcgctat
ttgccgcaaatgtatctggccgtgtttatcccgctgatcgtgctgtgcgtggtcttcccc
attaactgggcggcaggggtgattttgttggtcactgccccactgatcccatttttcatg
gcactggttgggatgggcgccgccgatgctaaccggcgtaactttcaagcactggctcgc
ctgagtggctcgtttttagatcgcttacgcggtttggaaacgctgcgtttattcaaccgc
gcaaacgcagaagtcaatcatatccgccatgatgcggaggattttcgtgagcgcaccatg
gaagtgctgtacatggccttcctgtcctcggccgtgctggagttctttacctccgtttcc
attgccattgttgccgtgtactttggtttttcctatctgggtgagctgaactttggccat
tacagtcagggcatcaccctgtttgccggttttctggtcctgatcttagctccagagttt
ttccaaccgctgcgtgacttaggcaccttctatcatgctaaagcccaagcggttggcgca
gccgaaacactggtcgatttcctgtcagcagaagcgcaaacacccgcccagggagataaa
ccgtaccaagcgcgtgcagatggttcagcgcatgaaaacagccagccaagcgccgagcac
gcatccgatatgccgcatatctgggcacaaaatctggagatcctctcgccacaaggaacg
gtgttggccggtccgctcgattttcggattttagctggcgaacagattgcgctcgtaggg
cgcagtggcgcagggaaaacgtcactgatgaatgtgctgctgggctttctgccctatcgc
ggttcactcaaggttaacggccaagaactaagcgagcttgatccgcaaagctggcgcgac
catctggcatgggtcggacaaaatccgcgtctgctgcaagggacgattcgcgacaatatt
ctgctcggcgcaccacacgcatcagaggccgaggttcagcgcgccgccgcatcggcgcac
gcggatgagtttatcgcccgtctgccgcaagggctggataccccagtcagcgatgaaggt
gcaggattatctgtcggtcaagcgcagcggattgccgtggcgcgtgcgctactgcgtggt
ggcgaatttttgctgctggatgaaccaactgccagtctggatgcacgcagtgagcagttg
gtaatgcaagcgctgtcgcacgccgcccaagggcgcaccacctttatgatcacccaccgg
ctggaggatgtgcgcaattgccatcaaatctggctgatggatcatggcaagctggttcag
caaggtgattttgccacgctgagcagtagcgatggcccttttgccgccatgctagccaac
cgtaatcaggagatttga
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