Plesiomonas shigelloides: SAMEA2665130_1349
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Entry
SAMEA2665130_1349 CDS
T04378
Symbol
ccpA
Name
(GenBank) Glucose-resistance amylase regulator
KO
K03484
LacI family transcriptional regulator, sucrose operon repressor
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_1349 (ccpA)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA2665130_1349 (ccpA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
HTH_3
HTH_10
HTH_24
HTH_23
Sigma70_r4
HTH_11
TetR_N
HTH_7
HTH_Tnp_ISL3
AstB
MarR_2
HTH_26
HTH_31
Motif
Other DBs
NCBI-ProteinID:
SBT60871
LinkDB
All DBs
Position
1:1524779..1525744
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AA seq
321 aa
AA seq
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MQKKITMAEISKQLGISKMTVSRYFNGGYVAEETRQKIDAVVKANHYTPNKFAQSMRCQS
NIIGFIAPRIESYTTSQVIKGALAAASDLQARLLFHATGFDHDSERQAVSEFTNLNALGT
ILIASKHSVTEPFYQSLHNLIFIGKHIPDQCCLYYPEEAALHALVTQVIGQLVQQQAPVH
AVHYVYDARMLSSRTQYMQQLLSQDYAHLPLTLQSLANSEDKAAYQSLRLQPHQLYFCAT
DNIAMRLYRCAKEQKLSIGRDIWIVGIGDYEYSDLLVPSLSSVAFNHYEIGYQSVKKLVE
RDFSALEGAFELKIRESSQFR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaaaatcacgatggccgagatctcaaagcagctcgggatctcaaaaatgacc
gtgtcacgctactttaacggcggttatgtggccgaagaaacacggcaaaaaatcgatgca
gtggtcaaagcgaatcactataccccgaataaatttgcccaatcgatgcgctgccaatct
aacattatcggttttattgcgccgcgtattgagtcttataccaccagtcaggtcatcaaa
ggcgccttggcggccgcgagcgatctgcaggcgcgtttgctgttccatgcgaccggtttt
gatcatgactccgagcgtcaggcggtgagcgagttcaccaatttgaatgcgttggggaca
attttgattgcctcgaagcacagcgtgaccgaaccgttttaccagagtctgcacaacctg
atttttatcggtaaacatatccccgaccaatgctgtttgtattaccccgaagaggccgcg
ttgcatgccttggtcacgcaagtgatcgggcaactggtgcagcagcaagcgccggttcat
gcggttcactatgtgtatgatgcgcggatgctgtcgagccgcactcagtatatgcagcaa
ctgctgtcgcaagattacgcgcatctgccgctcacgttgcaaagcttggccaattctgaa
gataaagcggcgtaccaaagtctgcgtttgcaaccgcaccagctctatttttgtgccacc
gacaacattgcgatgcgcctgtatcgctgtgccaaagagcaaaaattgagtattggccgt
gatatctggattgtggggatcggtgactatgaatacagcgatctgttagtgccgagtttg
agcagtgtggcctttaatcactacgaaattggttatcaatccgtcaaaaagctggttgag
cgtgacttcagtgcgctcgaaggtgccttcgaattaaaaatcagggaaagctctcagttt
agataa
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integrated database retrieval system
