Plesiomonas shigelloides: SAMEA2665130_1595
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Entry
SAMEA2665130_1595 CDS
T04378
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00230
Purine metabolism
pshi00240
Pyrimidine metabolism
pshi01100
Metabolic pathways
pshi01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SAMEA2665130_1595 (nrdD)
00240 Pyrimidine metabolism
SAMEA2665130_1595 (nrdD)
Enzymes [BR:
pshi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
SAMEA2665130_1595 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
SBT61112
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All DBs
Position
1:complement(1782113..1784233)
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AA seq
706 aa
AA seq
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MKPVVIKRDGCRVPFDGNLIKNAVLSAARTVEAMEPAYAEAVAQAVEDSLQGMTEVDIRT
IQNVVENQLMSGPHKAVARAYIEYRHDRDIAREKSSRLNNEIRGLIEQSNAALLNENANK
DSKVIPTQRDLLAGIVAKHYALQHLLPRDVAQAHERGELHYHDLDYSPFFPMFNCMLIDL
KGMLTHGFKMGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPYVKASY
DKHHAVAVEWGITDPEAFASARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTS
WESRLIQQSILKNRIAGLGKKCKTAVFPKLVFAVKDGLNHKKGDPNYDIKQLALECATKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGTYEEDGELIHDGRNNLGVVSLNLPRIALEAG
NDEEAFFRLLDDRLDLARKALQTRISRLEGVKARVAPILYMEGACGVRLKADDSVSEIFK
NGRASVSLGYIGLHETINALYGTETHVYDSEALRAKAIAIVQRLRDATDAWKKETGYGFS
LYSTPSENLCSRFCKIDTKDFGVVAGVTDKGYYTNSFHLDVEKQVNPYDKLDFEMPYPAI
ANGGFICYGEYPNMQHNVEALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFECTSKGF
TCPRCGNHEPTKVSVTRRVCGYLGSPDARPFNHGKQEEVKRRVKHL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccggttgtgattaagcgtgacgggtgccgtgtaccgttcgacggaaatttgatt
aagaatgctgttctcagtgctgctcgcactgtggaggctatggaacccgcttatgctgaa
gccgttgcacaagctgtagaagattccctgcaaggtatgaccgaggttgacattcggact
atccagaatgtggttgaaaaccaactgatgtccggtccacataaagcggtggctcgtgca
tacattgagtatcgccatgatcgcgatatcgcgcgtgagaaatccagccgtctgaacaac
gaaattcgtggcctgattgagcagagcaacgccgcgctgctgaacgaaaacgccaacaaa
gacagcaaggtgatcccgactcagcgtgatttgctggcggggattgttgcaaaacattac
gctctgcaacatttgctgccacgtgatgtggcgcaggcgcacgagcgtggcgagctgcat
taccacgatctggattactccccgttcttcccaatgttcaactgtatgctgattgatctc
aaaggcatgttgacccacggcttcaagatgggtaacgccgagattgatacgccaaaatcg
atttcaaccgccacagcggtaaccgcgcagatcattgcgcaggtagcgagccatatctat
ggtggtactaccatcaaccgtatcgatgaaattctggcaccgtatgtcaaagccagctat
gacaagcatcatgctgttgcggttgagtggggcattactgatccagaagcttttgcctca
gcacgtaccgaaaaagagtgttatgacgccttccaatctctggaatatgaagtcaacacg
ctgcacaccgcgaacggtcaaacgccgtttgtgactttcggttttggtctgggcacctct
tgggaatcccgcttgatccagcagtcgatcctgaaaaaccggattgccggtctgggcaaa
aagtgcaaaaccgcggtattcccgaaactggtgtttgcggtaaaagatggcctgaaccac
aaaaaaggcgatccaaactacgatatcaaacagctggcgctggagtgtgcaacgaagcgc
atgtacccagatatcctgaactacgatcaagttgtgaaagtcaccggctcgtttaagacc
ccgatgggttgccgtagcttcctcggtacttacgaagaagatggcgagctgatccatgat
ggtcgtaacaacttgggtgtggttagtctgaacctgccgcgcattgcgttggaagcgggt
aatgacgaagaggcgttcttccgtctgttggatgatcgtctggatctggcgagaaaagcg
ctgcagactcgcatcagccgtctggaaggggttaaagcccgtgttgcaccaatcctgtat
atggaaggggcatgtggcgtacgcctgaaggccgatgacagcgttagcgagatcttcaaa
aacggtcgagcttcagtgtctttgggttatatcggtctgcatgaaactattaatgcgctg
tatggcaccgaaacccacgtgtacgactccgaagcgctgcgcgccaaagccatcgctatc
gtacagcgtctgcgtgatgccactgatgcatggaaaaaagaaacgggctacggttttagc
ctgtacagcaccccgagtgagaacctgtgcagccgtttctgcaaaattgacaccaaagat
ttcggtgtggtggctggcgtgaccgacaaaggttactacaccaacagcttccacttggat
gtcgaaaagcaggtgaacccgtacgacaagctggatttcgaaatgccgtatccggccatc
gccaacggcggttttatttgctacggcgaatatccgaacatgcagcataacgttgaagcg
ttggaagatgtgtgggattacagctacagccgcgtgccgtattacggtaccaacacgcca
atcgatgagtgctacgagtgtggtttcaccggtgagtttgaatgtaccagtaagggcttt
acctgcccacgctgtggcaaccatgagccgaccaaagtgtctgtaactcgccgcgtgtgt
ggttatttgggcagccctgatgcgcgtccgtttaaccacggcaagcaagaagaagtgaag
cgtcgggttaagcacctgtaa
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