Plesiomonas shigelloides: SAMEA2665130_1632
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Entry
SAMEA2665130_1632 CDS
T04378
Symbol
treR
Name
(GenBank) Trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_1632 (treR)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SAMEA2665130_1632 (treR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
HTH_23
HTH_IclR
HTH_24
HTH_3
MarR
MarR_2
HTH_38
HTH_7
HTH_31
HTH_Crp_2
SpoIIID
HTH_AraC
Sigma54_DBD
HTH_Tnp_ISL3
MerR
Motif
Other DBs
NCBI-ProteinID:
SBT61149
LinkDB
All DBs
Position
1:complement(1819086..1820033)
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AA seq
315 aa
AA seq
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MDKKLTILDIARLSGVSKSTVSRVINQDPLVKPATRERVEQVIAEHGFVPSKPAQAMRSQ
SQKVIGIIVSRLDSGSENQAVRGMLEVLYARGYDAVLMESMFAPDKVLEHLAVLERRGVD
GIILFAFNDLDYAALQPFQHKLVLVAREAAGFSSVCFDDTGAVTAMLNQLVSSGIHDIAY
LGVDTADLTTGQRRLDAYLAYCQQSGISARYALGDLSLQSGYRLAAQLLTASTQALVCAS
DTLALGAAKYLQEQGRSDVKVTGLGNNRMLTFLFPNALSIDLGYKGAGEQAARQLLGQIE
QACAPSTTIAPCCVS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaactgaccatccttgatattgcccgtctgagtggcgttagcaaatcgacg
gtttctcgggtgatcaatcaagatcctctggtaaagccagcgacgcgtgaacgggttgaa
caggtgattgctgagcacgggtttgtgccaagcaaacccgctcaggccatgcgtagccaa
agccagaaagtgattggcatcattgtttcccgtctggattccggctctgaaaaccaagcc
gttcgcggcatgttggaggtgctgtatgctcgtggctatgacgccgtgttgatggaaagt
atgtttgcgccagataaagttctggagcacttggcggtactcgagcggcgtggggtggac
ggcatcatcctgtttgcctttaacgatctggattatgcggcgctgcaacctttccaacat
aagctggtgctggtggcgcgagaggcggcggggttctcatcggtctgttttgatgatacc
ggcgcggttaccgccatgttgaaccagttggttagcagtggaatacatgacatcgcctat
cttggcgtagatacggcggatttgaccaccggtcagcgccgtttggatgcgtacttagcc
tattgtcagcagagcggcatttcagcgcgctacgcactcggtgatcttagtttacaaagt
ggctatcggctggctgcgcaattactgacggccagcacacaagctctggtctgcgccagt
gacaccttggcattaggcgcagcaaaatacctgcaagaacaaggccgtagcgatgtcaaa
gttaccggccttggcaataatcgcatgctcacatttttgttcccgaacgccttgagcatt
gatttgggctacaaaggtgcgggcgagcaagctgcgcggcaactgctcggtcaaattgag
caggcatgtgcaccatccaccaccattgcgccttgttgcgtatcgtga
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