Plesiomonas shigelloides: SAMEA2665130_1690
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Entry
SAMEA2665130_1690 CDS
T04378
Symbol
hns_1
Name
(GenBank) Pathogenesis protein kcpA
KO
K03746
DNA-binding protein H-NS
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pshi03036
]
SAMEA2665130_1690 (hns_1)
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_1690 (hns_1)
Chromosome and associated proteins [BR:
pshi03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
SAMEA2665130_1690 (hns_1)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SAMEA2665130_1690 (hns_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
SAM_Exu
UPF0236
HAUS-augmin3
DUF3037
DUF4355
RdfA
MIF4G_like_2
DUF848
Aida_N
DUF4702
Motif
Other DBs
NCBI-ProteinID:
SBT61207
UniProt:
A0A1A9AY79
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All DBs
Position
1:complement(1886257..1886673)
Genome browser
AA seq
138 aa
AA seq
DB search
MSQEIISLFKNIRSLRAFAREVDLETLESVLEKLTVVVEERREELSTLKAQEEERARKLE
QYREMLKEDGIDLNDLLDIVAKEPAKKQGKRAPRAPKYEYLDENGEVKTWTGQGRTPSVI
AKALEKGESLDTFLIKTL
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagaaattattagcttatttaaaaacattcgttctctgcgtgcatttgcccgc
gaagtggatctggaaactttagaatctgtactggaaaagctgaccgtcgttgttgaagaa
cgtcgtgaagagctgtccacgctgaaagcgcaagaagaagagcgtgcgcgtaaactggaa
cagtaccgcgaaatgctgaaagaagacggtattgatctgaacgatctgctggatatcgtg
gcaaaagagccagcgaagaagcagggtaagcgcgcgccacgtgcacctaagtacgaatac
ttggatgaaaacggcgaagttaaaacctggactggccaaggccgtactccgagcgtaatt
gctaaagcgctggagaaaggtgagtctctggatactttcctgatcaaaactctgtaa
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