Plesiomonas shigelloides: SAMEA2665130_1990
Help
Entry
SAMEA2665130_1990 CDS
T04378
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshi03032
]
SAMEA2665130_1990 (gyrA)
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_1990 (gyrA)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMEA2665130_1990 (gyrA)
DNA replication proteins [BR:
pshi03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA2665130_1990 (gyrA)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMEA2665130_1990 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
SBT61493
LinkDB
All DBs
Position
1:complement(2192098..2194725)
Genome browser
AA seq
875 aa
AA seq
DB search
MSDLAKEITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGSEQIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLAYIENPEITIDELMTHIPGPDFPTAAIINGRRGIEDAYRTGRGKV
YLRARAEVEVDEKNGRESIIVHEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTTFGINMVALSQGQPKLLNLKDMLEAFVLHRRE
VVTRRTVYELRKARDRAHILEGLAVALANIDEIIELIRRAPTPSEAKAGLVARGWDLGHV
SVMLEAAGVDAARPDWLEAEFGIRENQYFLTEQQAQAILDLRLHKLTGLEHEKLLDEYKE
LLAQIAELLHILQSPERLMEVICEELTSIRAQFGDQRRTEITANSADINIEDLINQEDVV
VTLSHEGYVKYQPLTEYEAQRRGGKGKSATKMKEEDFIERLLVANTHDTILCFSSRGRLY
WLKVYQLPLASRGARGRPIVNLLPLEENERITAILPVREYANDQYIFMATANGTVKKTPL
TDFSRPRSAGIIAVNLNDDDTLIGVDLTHGNDEVMLFSAEGKVVRFAEDQVRPMGRTATG
VRGIKLSEQDKVVSLIVPKGEGEILTVTANGYGKRTASAEYPTKSRATQGVISIKVSERN
GLVVGAVQVEENDQIMIITNAGTLVRTRVKEVSVVGRNTQGVTLIRTSEEEQVVGLQRIL
DADDDEESTEEGVELSEQGDEQAASESAQDEPGEE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagccaaagaaatcacgccggtcaatatcgaagaagagctgaaaagctcc
tatctggactatgcaatgtccgtgattgtcggacgcgccttaccagatgtgcgtgacggc
cttaagccggttcaccgccgtgtcttgtacgccatgagcgtactcggtaatgactggaac
aaaccatataagaaatcggcccgtgtggtcggtgacgtaatcggtaaatatcacccacac
ggtgatagcgcggtttacgacaccatcgtacgtatggcgcagcctttctcactgcgttat
atgctggtcgacggacaggggaacttcggttccatcgacggcgactccgccgcagcgatg
cgttacaccgaagtgcgcatggccaagatcgcccacgaactgctggccgatctggacaaa
gaaaccgttgattatgtgcctaactacgacggcagcgagcagatcccggcagtattgccg
accaagatcccgaacctgctggtaaacggctcctccggtatcgccgtaggtatggcaacc
aacatcccaccgcacaacttgggcgaagtgatcgacggctgtttggcctacatcgaaaac
ccagagatcaccattgatgagctgatgacccatattccgggtccggatttcccgacggca
gcaatcatcaatggccgtcgtgggattgaagatgcttatcgtaccggtcgcggtaaagtg
tacctgcgcgctcgcgctgaagtggaagtggacgagaaaaacggccgcgaatccatcatc
gtgcacgagatcccgtatcaggtgaacaaagcgcgcctgatcgaaaagatcgccgagctg
gtaaaagacaagaaagttgaagggatcagcgccctgcgtgatgagtctgacaaagacggc
atgcgcattgtgattgagatcaaacgtgatgcggtcggtgaagtggtactgaacaatctg
tactcgcaaacccagctgcaaaccacgtttggtatcaacatggtagccttgagccaaggc
caaccgaagctgctgaacctcaaagacatgctggaagcgttcgtgctgcaccgccgtgaa
gtggtgacacgtcgtaccgtgtatgaactgcgtaaagcccgtgaccgcgctcatatcttg
gaaggtttggccgtagcgctggcgaacatcgatgaaatcatcgagctgatccgccgtgca
ccgactccatctgaagcgaaagccggtttggttgcgcgtggttgggatctgggccatgtg
tccgtcatgttggaagcggccggtgttgatgctgcccgtcctgactggctggaggctgag
tttggtatccgtgaaaaccagtacttcctgactgagcaacaagcgcaggctattttggat
ttgcgtctgcacaagctgacaggtctggagcacgagaagctgctggacgagtacaaagag
ctgctggcacaaatcgctgagctgttgcatatcctgcaaagcccagagcgtctgatggaa
gtgatctgcgaagagctgaccagcattcgcgcgcagtttggcgatcagcgccgtactgaa
atcactgccaacagtgctgacatcaacatcgaagacctgatcaatcaggaagatgtagtg
gtcacactgtcgcacgaaggttatgtgaagtatcagccgctgactgagtacgaagcacag
cgccgtggtggtaaaggcaagtctgcgactaagatgaaggaagaagacttcattgaacgt
ctgctggtggctaacacccacgacaccattttgtgcttctcgtctcgtggtcgcttgtac
tggctgaaggtatatcagctgccattggccagccgcggtgctcgtggccgtccgattgtg
aacttgctgccgctggaagaaaacgagcgtattaccgcgatcctgccggttcgtgagtat
gcgaatgatcagtacatcttcatggccacagccaacggtacagtgaagaagacgccactg
actgactttagccgtccgcgtagcgccggtatcatcgctgttaacctgaatgatgacgac
accctgattggtgtggatctgactcacggtaatgacgaagtgatgctgttctccgccgaa
ggtaaagtggtgcgtttcgccgaagatcaagtgcgtccaatgggccgtaccgcgaccggt
gtgcgcggcatcaagctgagcgagcaagacaaagtcgtttctctgatcgtgccaaaaggc
gagggtgagatcctgactgtcaccgccaacggttacggtaagcgtacggcatctgcggag
tacccgacgaagtcccgtgcgacccaaggggttatctccatcaaggtcagcgagcgtaac
ggtctggttgtgggcgcggtgcaggttgaggaaaatgatcagatcatgatcatcaccaat
gccggtacgctggttcgcacacgagtgaaagaagtgagcgtggtgggtcgtaacacccaa
ggcgtgaccttgattcgcaccagcgaagaagagcaagtggttggtttgcagcgtatcttg
gatgccgatgatgatgaggaaagcaccgaagagggtgttgaactgtcagaacagggtgac
gagcaagctgctagcgagtctgcacaagacgagccaggcgaagagtaa
DBGET
integrated database retrieval system
