Plesiomonas shigelloides: SAMEA2665130_2039
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Entry
SAMEA2665130_2039 CDS
T04378
Symbol
ycfS
Name
(GenBank) Probable L,D-transpeptidase YcfS precursor
KO
K19236
L,D-transpeptidase YcfS
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMEA2665130_2039 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshi01002
]
SAMEA2665130_2039 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshi01011
]
SAMEA2665130_2039 (ycfS)
Peptidases and inhibitors [BR:
pshi01002
]
Cysteine peptidases
Family C82
SAMEA2665130_2039 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
pshi01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SAMEA2665130_2039 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
SBT61542
UniProt:
A0A379CQP3
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All DBs
Position
1:complement(2252702..2253637)
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AA seq
311 aa
AA seq
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MKAVRVFAGLLVSALAMMTVPSALAASYPLPPAGSRLVGTEETYVVPGNGESLEAIAARY
QVGLIAMLEANPDVDPFLPQKGMTLRIPTQMLLPDTPREGIVLNLAELRLFYYPKGSNTV
EVYPIGIGRVGRSTPTMVTSIISKRANPTWTPTANTRKEYAAQGISLPAVVPAGPENPMG
LFALRLAHGKGEYLIHGTNANFGIGMRVSAGCIRLRPDDIETLFNTVPVGTRVQVVNEPI
KVSVEPNGQRYIEVHQPLSKNESDDPQTMVIPFTKPVQSFILSPLTNSTDAEKEVARRSG
IPVNVTAGESN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctgttcgtgtatttgccggcctgctggtgtctgcgctggcaatgatgacagtg
ccttcggcactggctgcgtcttatcctttgccgccagcgggtagccgtctggttggtact
gaagaaacctatgttgttccaggtaacggtgagtcgctcgaagcgattgccgcacgttat
caagtaggtctgattgcgatgttggaagcgaatcctgatgtggatccgttcctgccacaa
aaagggatgaccctgcgtatcccaactcagatgctgctgccagatacgccacgtgaaggt
atcgttcttaacttggcagaactgcgtctgttctactatccaaaaggctctaataccgtt
gaggtttacccaattggtatcggccgtgtgggccgctcgacaccaaccatggtgaccagc
atcatctccaagcgtgcaaaccctacgtggacgccaacagcgaatactcgtaaagagtac
gcagcccaaggtatctccttgccagccgtagtaccggccggtccagaaaacccaatgggt
ctgtttgccctgcgtttggcgcacggtaaaggcgaatacctgattcacggcactaacgct
aacttcggtatcggcatgcgcgtgagcgccggctgcatccgtctgcgcccagatgacatc
gaaaccctgttcaacaccgtaccagtaggtacccgtgtgcaggtggtgaacgagccaatc
aaagtttctgtcgagccaaatggccagcgttatatcgaagtacaccagccgctgtctaag
aatgaaagcgatgacccacagactatggtgatcccattcaccaagccggttcaatctttc
attctgagcccactaactaacagcactgatgctgagaaagaagtggcgcgtcgctctggt
atcccagtgaatgtgaccgcaggcgaaagcaactga
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