Plesiomonas shigelloides: SAMEA2665130_2047
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Entry
SAMEA2665130_2047 CDS
T04378
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03030
DNA replication
pshi03430
Mismatch repair
pshi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAMEA2665130_2047 (dnaX)
03430 Mismatch repair
SAMEA2665130_2047 (dnaX)
03440 Homologous recombination
SAMEA2665130_2047 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshi03032
]
SAMEA2665130_2047 (dnaX)
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_2047 (dnaX)
Enzymes [BR:
pshi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA2665130_2047 (dnaX)
DNA replication proteins [BR:
pshi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAMEA2665130_2047 (dnaX)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAMEA2665130_2047 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_16
ResIII
AAA_2
AAA_18
PIF1
TsaE
Motif
Other DBs
NCBI-ProteinID:
SBT61550
LinkDB
All DBs
Position
1:complement(2262454..2264706)
Genome browser
AA seq
750 aa
AA seq
DB search
MSYQVLARKWRPHNFAEVVGQEHVLTALANGLSLGRLHHAYLFSGTRGVGKTSIARLFAK
GLNCETGITATPCGVCETCREIDEGRFVDLLEIDAASRTKIEDTRELLDNVQYTPVRGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKALDP
DQIRAQLEKVLTAEAIPFEARALLQLARAAEGSMRDALSLADQAIAMGGGDVTATGVSHM
LGTLDADQPLALVEALHRGDAEQVMLLLQQAAERGTDWEALLVETSAILHRVAMAQLLPG
TLEEADPYAVRLRELARTVSPQDIQLFYQTLLVGRKELLLAPDRRSGTEMTFLRALAFHP
KKVSTPVASGTFDAMAAAGQSPSRAPVSNAAPTHIAPTNAAPAHHSAPVNTAAMPAASAM
QSGHMPAQAPMQMQQTQQAPMPPSQAPSYPASSHVAAGRVAPSMPPAAAPAAMEPSATVP
APMGDSAPVAGFPAGSADSPALQALQARAQLRRQRHAEPSAGEGTSTKKTTPVAAAVTLR
PAGNKPSPLERLAAAGEQRVRPSAGPRTADSAVSSKAKKPEAYRWKPVNPVEEAPEVVTP
DVVRSSLEHEKTPEMALKLAHEACERDSWSAQIEKLNVAKLVEQLALNAVKEEPAPGQVR
LLLRSSQRHLNTDRAKEQLSEALSQLAGAPVTLEIIENDDKTRLTPLEIRQAIYDEKLAQ
ARQSLQDDKNILQLRRLFGADLEDDSIRPL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttttagcccgtaagtggcgtccacataattttgcagaagtagtgggt
caggagcacgtactgaccgcgctggcgaacggtttatcgctgggccgtctgcaccatgca
tatctcttttccggtacgcgcggggtagggaaaacctctatcgcccgtttgttcgccaaa
gggctgaactgcgaaaccggtatcacggctacgccatgtggcgtgtgtgaaacttgccgc
gaaattgatgaagggcgttttgttgacctgctggagattgacgccgcttcccgcaccaag
atcgaagatacccgtgagctgctagataatgtgcagtacaccccggtgcgaggccgcttc
aaggtctatctgatcgacgaagtgcacatgctctcgcgtcacagctttaacgcgctgctt
aagacgctggaagagccgccggagtacgtgaaattcttgctggcgaccacggatccgcaa
aaattaccggtgacgatcttatcgcgctgtttgcagtttcatctaaaagcactggatccg
gatcagatccgtgcccaattggaaaaagttctgaccgccgaagccatcccgtttgaagcg
cgtgcattgctgcaactggcgcgcgcagcggaaggcagcatgcgtgatgcgctcagtctg
gctgaccaagccattgccatgggcggtggtgatgtgaccgccacgggtgtttcccatatg
ttgggcaccttggatgccgatcagccgttggcgttggtggaagccttgcatcgcggcgat
gccgagcaggttatgctgctgttgcagcaagcagccgagcgaggtaccgattgggaagct
ttgctggtggagacatcagcgattttacatcgcgtggcgatggcgcaattgctgccaggt
acgctggaagaggccgacccgtatgccgttcgcttgcgtgagttggcgcgaaccgtttcg
ccgcaggatattcaactgttttatcagaccttgctggtgggccgtaaagagctgctgtta
gcgccggatcgtcgcagtggcactgaaatgactttcctgcgcgcattggcttttcatcca
aaaaaagtgagcacgccggtagcgtctggtacttttgatgccatggcggcagccggtcag
agtccaagccgtgcaccggtatccaatgccgcacctactcacattgcgccaacgaatgca
gcgccagcgcatcactccgcaccagtgaacacggccgccatgccagccgcatcggcgatg
caaagtgggcatatgcctgcgcaagcgccaatgcaaatgcagcaaacgcagcaagcacct
atgccaccctcacaagcgccgtcgtatccagcatcgtcgcatgtcgctgcggggcgtgta
gcaccgagtatgccaccagcggctgcgcctgcggcaatggagcctagcgctaccgtacct
gcaccaatgggagatagcgcgccagttgctggcttccctgcagggagtgctgattcgcca
gcgttacaggccttgcaagcccgtgcgcaactgcgccgtcagcggcatgccgagccttcg
gcgggtgagggcactagcacaaaaaaaacgacgccggttgcagcagccgtaaccctgcga
ccggccgggaataaaccttcgccactggagcgcttagccgccgccggtgagcaacgtgtg
cgtccgagtgcggggccgcgaacggcagatagcgccgtgagcagcaaagccaaaaagccg
gaagcttatcgctggaagccggttaatccagtagaagaagcaccagaggtggtgacaccc
gatgtcgtgcgctcgtcactggagcacgaaaaaacgccagaaatggcgctgaagctggcg
cacgaagcctgtgagcgtgatagctggtcggcgcaaattgaaaagctgaacgtggcgaaa
ttggtggaacagctggccttaaatgcggtaaaagaggagcctgcacccgggcaggttcgt
ttgttactgcgctcatcgcagcggcatttgaacaccgatcgcgccaaagaacagttaagc
gaggcgctgagccaattggcgggcgcaccggtaacgcttgaaattatcgaaaatgatgat
aaaacccgtctgactccgcttgagattagacaggcgatttatgatgaaaagctggcgcag
gcgcgtcagtcgttacaggatgataaaaatatcctgcaactgcgccgtttattcggcgca
gatttggaagatgacagcatccgaccgttgtaa
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integrated database retrieval system
