Plesiomonas shigelloides: SAMEA2665130_2097
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Entry
SAMEA2665130_2097 CDS
T04378
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA2665130_2097 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_2097 (xthA)
Enzymes [BR:
pshi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SAMEA2665130_2097 (xthA)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SAMEA2665130_2097 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
SBT61594
LinkDB
All DBs
Position
1:2315379..2316185
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AA seq
268 aa
AA seq
DB search
MKFISFNINGLRARPHQLEEIVTLHQPDVIGLQEIKVHDDMFPLEDVAKLGYHVFHHGQK
SHYGVALLTKTKPLAVRKGFPTDDEDAQRRMIMADLETPAGTLTVLNGYFPQGESRDHPT
KFLAKQKFYADLMNYLSEHHSPDQPIVIMGDMNISASDLDIGIGEENRKRWLRTGKCSFL
PEEREWMDTLLQWGLVDTFRALHPDTHDRYSWFDYRSKGFDDNRGLRIDQILATQMLAER
CNEAGIDYQTRGMEKPSDHAPIWANFSL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatctcctttaacatcaatggattacgggctagaccacatcagctggaagaa
atagtcacgctacatcaacccgatgtaattggtctgcaggagatcaaggttcacgatgac
atgtttccgctggaagacgtcgctaaactgggctatcacgtcttccaccatggccaaaaa
agccattatggcgtcgcgttgctgaccaaaaccaagccactggcagtgcgcaaagggttt
ccgaccgatgatgaagacgcccagcgccgcatgatcatggcagatctggaaacgccagcc
ggtacattgaccgtcttaaacggctactttccacaaggggaaagccgcgatcacccaact
aagtttctggccaaacaaaaattctacgccgatctgatgaattatctcagcgagcatcat
tcaccggatcaaccgattgtgatcatgggcgatatgaacatcagtgccagcgatttggat
atcggcattggtgaagagaatcgtaaacgctggctgcgtaccggcaaatgctccttcttg
ccagaagagcgcgagtggatggataccctgctgcaatggggtctggtggataccttccgc
gccctgcatccagatacccatgatcgctattcatggtttgattatcgctcgaagggcttt
gatgataaccgtggtctgcgcatcgaccagatcttggccacccagatgctggccgagcgc
tgcaacgaagccggtattgattatcaaacgcgtgggatggaaaaaccgtctgatcatgcg
cctatctgggctaatttttcgctctaa
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