Plesiomonas shigelloides: SAMEA2665130_2186
Help
Entry
SAMEA2665130_2186 CDS
T04378
Symbol
lytM
Name
(GenBank) Glycyl-glycine endopeptidase lytM precursor
KO
K19304
murein DD-endopeptidase [EC:3.4.24.-]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshi01002
]
SAMEA2665130_2186 (lytM)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshi01011
]
SAMEA2665130_2186 (lytM)
Peptidases and inhibitors [BR:
pshi01002
]
Metallo peptidases
Family M23
SAMEA2665130_2186 (lytM)
Peptidoglycan biosynthesis and degradation proteins [BR:
pshi01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
SAMEA2665130_2186 (lytM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Csd3_N2
Peptidase_M23
LysM_OapA
NMB0315_dom_I
LysM
Biotin_lipoyl_2
DUF6287
Motif
Other DBs
NCBI-ProteinID:
SBT61681
LinkDB
All DBs
Position
1:complement(2410377..2411624)
Genome browser
AA seq
415 aa
AA seq
DB search
MLTALTLAVAAWNPVLNHTPLKREIALDIETQRDLQPEASEPLDQVMPNDAPELEPEKDD
LDKKLEEAVHEHTVESGETLGSILTQYGIDMSDVHALTKSNPEVQRLGIGQELSWKLDDD
GLLKQLTWAVNNRETRVYDRADNGAYKRSVETMQGTWQNDRVAGTIDGSFVSSAKAAGLS
TREIQQVTKALQWQVDFRKLKKGDKFSVLMSREFLDGKVTGSGEVKAVRLNSSGKDYYAI
QAEDGRFYNREGAGLAKGFLRLPTLKQYRISSNFNPRRLHPVTRRVAPHNGTDFAAPIGT
PVLSIGDGEVVKAGYHPYAGNYVVIRLGRQYQTRFLHLSKILVKQGQKVKKGDRVALSGN
TGRSTGPHIHYEFLLNSRPVDPMKVKLPMSDGLAGQERRAFLARTKEYLPQLTLD
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgcattaacgttggccgttgccgcgtggaatccggtgttgaaccatactccg
cttaaacgcgaaattgcgctggatattgaaacccagcgcgatttgcagccggaggcaagt
gagccattggatcaggtgatgccaaatgatgcgcccgagctggagccagagaaagatgat
ctggataaaaagctcgaagaggcggtacatgagcacaccgtggaaagtggtgagaccctc
ggcagcattctgacacagtacggcattgatatgtcggatgtgcatgcactgacaaaaagt
aaccccgaagttcagcgtttagggattggccaagagctgagctggaaactggatgatgat
ggtctgctcaagcaattgacttgggcggtcaataatcgtgaaacccgcgtttacgatcgt
gcagacaatggtgcttataagcgctctgttgaaaccatgcaagggacgtggcaaaacgat
cgcgttgcaggcactatcgatggtagcttcgtatccagcgcgaaagcagcgggtttgtcg
acccgtgaaattcagcaggttaccaaagcgttgcagtggcaggtggattttcgcaagctg
aaaaaaggcgataaattcagtgttctgatgtcacgtgagtttttggacggtaaagtgacc
ggctccggtgaagtcaaagcggtacgcttgaactcctccggcaaagactattacgcgatt
caggctgaagatggccgcttctataaccgtgaaggtgcgggcttagccaaaggtttcctg
cgtctgccaactttaaagcagtatcgcatttcgtcgaattttaacccacgtcgtctgcat
ccagtaacgcgccgtgtggcgccgcataacggtactgactttgcggcaccaatcggtacg
ccggtgctgtctatcggtgatggtgaagtggtgaaagccggttaccacccgtatgccggt
aactatgtggtgatccgtttaggtcgtcagtatcagacgcgtttcctgcacctgagcaag
attttggttaagcaagggcagaaagtgaagaaaggcgaccgtgtcgcgctgtcgggtaac
actgggcgttcaaccgggccacacattcactatgaattcttgctgaactcccgtccggtg
gatccgatgaaggtgaaactgccgatgtcggacggtttggctggtcaagagcgtcgtgcc
ttcttggcgcgtaccaaagagtacctgccacagctgacgctggattaa
DBGET
integrated database retrieval system
