Plesiomonas shigelloides: SAMEA2665130_2213
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Entry
SAMEA2665130_2213 CDS
T04378
Symbol
chb
Name
(GenBank) Chitobiase precursor
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00511
Other glycan degradation
pshi00520
Amino sugar and nucleotide sugar metabolism
pshi00600
Sphingolipid metabolism
pshi01100
Metabolic pathways
pshi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
SAMEA2665130_2213 (chb)
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
SAMEA2665130_2213 (chb)
00511 Other glycan degradation
SAMEA2665130_2213 (chb)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
SAMEA2665130_2213 (chb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pshi03110
]
SAMEA2665130_2213 (chb)
Enzymes [BR:
pshi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
SAMEA2665130_2213 (chb)
Chaperones and folding catalysts [BR:
pshi03110
]
Intramolecular chaperones
Others
SAMEA2665130_2213 (chb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
BNR
Motif
Other DBs
NCBI-ProteinID:
SBT61708
LinkDB
All DBs
Position
1:complement(2438732..2441407)
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AA seq
891 aa
AA seq
DB search
MLRLSAIAIATTMALTGCAGSGDSNQTLVNRMGSQLNVQYAVLDNHGGENGVNCGALGAE
WAACNKATITLTNNGGEISGKAWTIYFHSIRQILAVENEQFKISHVTGDLHKLEPTDKFD
GFQSGEVVEIPIIGEYWQLFETDFMPRWYVTAGDAKPKVISNTDTENVSEFSAPITGDNW
KRTSGDKNVLMNAQTRYAKNQDVPVLPAQQLRGQILPTPVEVTVGKADASLANGINIQTL
ALPKTTLDAVSERLTQLGVTTSSAADAYPVDVKINKAAFKGKWQTEGAYTLKVTPQGAQI
VGNDAAGAFYGLQSLISLIPMDGSKTIATVTVKDMPRFEHRGMHADVGRNFHNKESILRL
LDQMAAYKLNKFHFHLSDDEGWRLEIPGLPELTDVGSQRCHDLSETQCLLPQLGSGPDSN
NQGSGFYSKQDYVDILKYAKARNIEVIPELDMPAHARAAVVSMEARYKKLMAEGKEAEAN
QYRLLDPQDTSNTLSVQFYNRTSYLNPCLESSQAFVDKVIGEVAAMHKEAGMPLQTWHFG
GDEAKNIRLGGGFQDVNAAEKVDWRGTIDQSKEDKPWAKSPVCQKMVESGKVSDFEHLPS
QFAKEVSQLVNKHGITTMMAWQDGLKDASGASDFATKKTGVNFWDTLYWGGFDSANDWVN
KGYELVVSNPDYVYFDMPYEVNPKESGYYWATRFSDERKVFGFAPDNLPQNAETSVDRDG
NHFNAKSDKKWGGATGVQGQFWSESIRTDPGMEYMIFPRMLPLAERAWHQADWELDYVAG
REFKGGETHYVNSKALNRDWARFANLLGQRELAKLDAAGVQYRLPVPGAVVTAGVLEVNT
ALPGLAVEYSADNGKTWQRYDAAAKPTVTGEVQVRTVSPDGKRASRVESVK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgttgagattatctgccattgctatcgcgaccacgatggcgttgaccggttgtgccggt
agcggcgacagcaaccagactctggttaaccgtatgggtagccagttgaatgtgcagtac
gcagtactggataaccacggtggcgaaaacggtgtcaactgtggcgcgctgggtgccgag
tgggcggcgtgtaacaaggccacgattacactgaccaacaatggcggtgaaatcagcggt
aaagcatggaccatctatttccacagcatccgccaaatcctggcggtggaaaatgaacaa
ttcaagatctctcacgtaaccggtgacctgcataaactggagccaactgacaagtttgat
ggtttccaatccggtgaagtggttgaaattcctatcattggcgagtactggcagctgttt
gaaactgacttcatgccacgttggtatgtcaccgccggtgatgctaagccaaaagtcatc
agcaatactgacactgaaaacgtgagcgagttttcggctccaatcaccggtgataactgg
aagcgtaccagtggtgacaaaaacgtgctgatgaatgcgcaaacccgttacgctaagaac
caagatgtgccggttctgccagcgcagcagctgcgtggtcagatcctgccaaccccagtg
gaagtcactgtgggtaaagccgatgccagcttggcaaacggtatcaatatccaaacattg
gcactgccgaaaaccacactggacgcagttagcgagcgtttgacgcagttaggggtgaca
acctctagcgcagcggatgcttatccggtagacgtgaaaatcaacaaggcggcgtttaaa
ggtaagtggcagaccgaaggggcctataccctgaaagtgacaccacaaggcgcgcagatt
gtgggtaatgacgccgcgggtgcgttctatggcttgcagtctctgatttcactgatcccg
atggatggcagcaaaaccatcgccaccgtgactgtgaaggatatgcctcgctttgaacac
cgtggtatgcatgccgatgttggccgtaacttccacaacaaagaaagcattctgcgtctg
ctggatcaaatggcagcgtacaagctgaacaaattccacttccacctgagtgatgatgaa
ggctggcgtttggagatccctggtctgcctgagctgaccgacgtgggcagccagcgttgc
catgatttgagcgaaactcagtgtctgctgcctcagttgggctcaggtcctgacagcaac
aaccaaggtagtggcttctacagcaagcaagattatgtggatatcctgaagtacgccaag
gcgcgtaacatcgaggtgatcccagagctggatatgccagcgcacgcgcgtgcggcggtc
gtatcgatggaagcgcgctacaagaaactgatggcggaaggcaaagaggccgaagcgaac
cagtatcgtctgctggatccgcaagatacctctaacacgctgtctgtacagttctataac
cgcactagctacctaaacccgtgcttggaatcgtctcaagcgttcgtcgataaggtgatc
ggtgaagtggcggcgatgcacaaagaagccggtatgccgctgcaaacttggcactttggt
ggtgacgaagcgaagaacattcgcttgggcggaggcttccaagatgtgaacgcggccgag
aaagtagattggcgtggcacgatcgaccagagcaaagaagataagccgtgggccaagtct
ccggtatgtcagaagatggtcgaaagcggcaaggtttctgattttgaacacctgccaagt
cagtttgcgaaagaagtcagccagttggtgaacaagcatggcatcactaccatgatggcg
tggcaagatggcctgaaagatgccagcggcgcatctgactttgcaactaagaaaaccggt
gtgaacttctgggataccctgtactggggcggctttgattcagccaatgattgggtgaac
aaaggctatgagctggtggtctctaacccagattacgtgtacttcgatatgccatacgaa
gtgaacccgaaagagagcggttattactgggcaacccgtttcagcgatgagcgtaaagtg
ttcggtttcgcgccagacaacttgccacaaaacgcggaaacctcagtagaccgtgacggc
aaccactttaacgcgaagagcgataagaagtggggcggcgcgacaggcgtacaaggtcag
ttctggagtgaaagtatccgtaccgaccctggcatggaatacatgatcttcccacgtatg
ctgccactggctgagcgtgcttggcaccaagcggattgggagctggattacgtggcgggt
cgtgagttcaaaggcggtgaaacccattacgtgaacagcaaagcgctgaaccgtgattgg
gcgcgttttgccaacctgttgggtcagcgtgagctggcgaagctggatgctgccggtgtg
cagtaccgtctgccggtaccgggtgcggtagtgacagcaggcgtgttggaagtaaacacc
gcgttgccgggtctggcggttgaatactctgccgacaacggtaaaacgtggcagcgttac
gacgccgcagcgaagccgactgtcactggtgaagtacaagttcgtactgtcagcccagat
ggcaagcgtgctagccgtgtagagagcgttaaataa
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