Plesiomonas shigelloides: SAMEA2665130_2260
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Entry
SAMEA2665130_2260 CDS
T04378
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshi03400
]
SAMEA2665130_2260 (dinB)
Enzymes [BR:
pshi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAMEA2665130_2260 (dinB)
DNA repair and recombination proteins [BR:
pshi03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
SAMEA2665130_2260 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
Cdd1
DNA_pol_lambd_f
HHH_5
RecR_HhH
LAP1_C
POLH-Rev1_HhH
Motif
Other DBs
NCBI-ProteinID:
SBT61746
LinkDB
All DBs
Position
1:complement(2487437..2488492)
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AA seq
351 aa
AA seq
DB search
MRKIIHIDMDCFYAAVEMRDNPKLRHVPLAIGGRSERRGVISTCNYVARRFGVHSAMPTA
QAFKLCPHLTLLPGRMDVYKRVSQQLHAIFRRYTPRIEPLSLDEAYLDVTECSLFHGSAT
WIAEDIRRAIREELQLTASAGVAPVKFLAKIASDMNKPDGLYVIRPEQMPDFVAALPLNK
IPGIGKVSAQKLADMGLYTCADVHRVELKTLADKFGKQGHMLWQRSQGIDEREVNPDRQR
KSVGVERTLAEDINSLDECRRLVTELYPELERRLQRVSPSLAIARQGVKLKFSDFQLTTQ
EHVYPVLCLDDLLQLAESVWQRCEGRGVRLVGLHVTLLDPQLIRQLALPWS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagattattcatattgatatggactgcttttatgcagcagtcgaaatgcgcgac
aaccccaaattgcgccatgtaccgttggctatcggcgggcgaagtgagcggcgcggggtg
atcagcacctgtaattatgtggcgcgccgttttggtgtgcacagtgccatgcctaccgcg
caagcctttaagctgtgtccgcatctgacgctattacctgggcggatggatgtgtacaaa
cgggtttcacaacagctacatgccattttccgccgctataccccgcgtattgaacctctg
tcattggatgaagcctatttagatgtcaccgagtgcagcttattccacggctcggcgacc
tggattgccgaggatatccggcgtgctatccgcgaagagttacaactcacagcttccgcg
ggtgttgcgccggtaaagtttttggccaaaatcgcctccgacatgaataagcccgatggg
ctgtatgtgattcgcccagagcaaatgccggattttgtcgccgcattgccgctcaataaa
atccccggtattggcaaagtctcggcgcaaaaactggctgatatgggtctgtatacttgc
gccgatgttcatcgtgtggagctgaaaacgttagccgacaagtttggcaagcaaggccat
atgctgtggcaacgcagtcaggggattgatgagcgggaagttaaccctgatcggcagcgc
aaatcggttggggtagagcgcaccttagccgaagatattaactcgctcgatgagtgccgc
cggttggtgacggagttgtatcccgaattagagcgtcgcttgcagcgggtgagtccgtct
ttggcgattgcgcggcaaggggtgaagcttaagttttccgattttcagctcaccacccaa
gagcatgtctatccggtattgtgcctcgatgatttgttgcaactggccgagtcggtttgg
cagcgctgcgaagggcgtggggtgcgtttagtcggcttacatgtaaccttgcttgaccca
caattgattcggcaattggctttgccgtggagctag
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