Plesiomonas shigelloides: SAMEA2665130_2299
Help
Entry
SAMEA2665130_2299 CDS
T04378
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshi03009
]
SAMEA2665130_2299 (rluD)
Enzymes [BR:
pshi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SAMEA2665130_2299 (rluD)
Ribosome biogenesis [BR:
pshi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMEA2665130_2299 (rluD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
LPD14
TTC3_9th
Motif
Other DBs
NCBI-ProteinID:
SBT61785
LinkDB
All DBs
Position
1:complement(2523714..2524691)
Genome browser
AA seq
325 aa
AA seq
DB search
MAQQIELTATVAYEQLGQRLDQALAELFPDYSRSRIKTWIQDGCVRVDGTVVDRPREKVL
GGEQIAVMTVIEEQERWVAQDIALDIVYEDEHILVINKPRDLVVHPGAGNADGTILNALL
HYCPSISDVPRAGIVHRLDKDTTGLMVVAKTVPAQTHLVEALQRREITREYEAIAIGIMT
KGGTVDEPIARHPSKRTHMAVHPMGKPAVTHYRIMERFRAHTRLRLRLESGRTHQIRVHM
AYISHPLIGDPLYGGRPRPPKGASEEFMQVLRRFDRQALHATMLRLVHPITGEQMEWHAP
IPQDMVELVEALRADTLAHKDEMDD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaaattgaacttactgcgacagtggcttacgagcaactcgggcaacgctta
gaccaagctctggctgagttgttcccagattactcccgctcgcgcatcaaaacctggatt
caggatggctgcgtacgggtcgatggcactgtcgtcgatcgcccgcgggaaaaggtcctc
ggcggtgagcagatcgcggtcatgaccgttatcgaagagcaggaacgctgggtagctcag
gatatcgcactggatatcgtttatgaagatgaacatattctggtgattaataagccgcgc
gatctggtggtccatccgggcgccggtaatgcggacggcactattttgaacgccttgctg
cactactgcccatcgattagcgatgtgccgcgagccgggatcgtgcaccgtctggataaa
gacactaccggtttgatggtggtggcgaaaaccgttccggcgcaaacccacttggtggaa
gcgctgcagcgccgtgaaatcactcgtgaatacgaggcgattgccattggcatcatgacc
aaaggcggtaccgtggatgagccgattgcgcgccatccaagtaagcgtactcacatggcg
gtgcacccaatgggtaaaccggcggttacgcactatcggatcatggagcgtttccgcgcc
catacccgtttgcgtctgcgtctggagtcggggcgtacgcaccagatccgtgtccacatg
gcgtatatcagccatccactgattggcgacccgttgtacggtggccgtccacgtccgcca
aagggcgcgtcggaagagtttatgcaggtactgcgtcgctttgaccgtcaggctctgcac
gccactatgctgcgtctggtgcacccgatcaccggtgagcaaatggagtggcatgcgccg
attccacaggatatggtagagctggtggaagcgctgcgtgccgatacgctggcgcacaaa
gacgagatggatgactga
DBGET
integrated database retrieval system
