Plesiomonas shigelloides: SAMEA2665130_2412
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Entry
SAMEA2665130_2412 CDS
T04378
Symbol
gcvA
Name
(GenBank) Gcv operon activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_2412 (gcvA)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SAMEA2665130_2412 (gcvA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
SBT61885
LinkDB
All DBs
Position
1:complement(2643523..2644443)
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AA seq
306 aa
AA seq
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MGMSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNR
SLLLTEEGQAYFLDMKEIFTALSDATEKLLARTAKGTLTVSLPASFAIQWLVPRLADFNA
SHPDIDVRIKAVDIDEGSLTDDVDVAIYYGRGKWFGLRVDLLCNEYLIPLCSPALLTGEH
PLLSPHDLVHYTLLHDTSRRDWQAFTRQLGLTDINVNQGPIFSHTALVLQSAIHGQGVAL
ANNVLAQPELKAGRLVCPFDDVLMSKNAFYVVCHDTQAELGKIAAFRQWMLSRAQQEQDM
LRLRSV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgtcaagacgacttccgccgctcaactcgctcaaagtttttgaagccgccgcg
cgccatttaagctttacccgggcagccgaagaactgtttgttacacaggctgctgtcagc
catcagattaaggctttggaagaatttctggggctaaaattattccggcggcgtaatcgt
tcgctgctgctgaccgaagaagggcaggcctatttcctcgatatgaaggaaattttcacg
gcgctgtctgatgccaccgaaaaattgttagcacgtaccgccaagggcaccttgaccgtc
agcttgccggccagtttcgccattcaatggctggtgccgcggctggcggattttaatgcc
tcgcaccccgatattgatgtgcgcatcaaggcggtagacattgatgaaggttcgctgacc
gatgatgtggacgtggcgatttattatggccgcggtaagtggttcggcctgcgcgttgac
ctgttatgtaacgagtatctgatcccgctgtgttctccggcgctgctgaccggcgagcat
ccgctgctttcaccgcatgatttggtgcactatacgttattgcatgatacctcgcgccgt
gattggcaagcctttacccgccagttagggctaaccgatatcaacgttaatcaagggccg
attttcagccatacggcgctggtgttgcagtcggcgattcatggccaaggggtggcgctg
gccaataatgtgctggcgcaaccggagctgaaagccggtcgcttagtctgtccgtttgat
gatgtgttgatgagtaaaaacgctttttatgtggtttgccatgacacgcaggcggaactg
ggtaaaatagccgccttccggcaatggatgttgtcgcgggcgcagcaagaacaagacatg
ctgcgacttcgcagcgtgtaa
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