Plesiomonas shigelloides: SAMEA2665130_2548
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Entry
SAMEA2665130_2548 CDS
T04378
Symbol
speC
Name
(GenBank) Ornithine decarboxylase, constitutive
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi00330
Arginine and proline metabolism
pshi00480
Glutathione metabolism
pshi01100
Metabolic pathways
pshi01110
Biosynthesis of secondary metabolites
pshi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SAMEA2665130_2548 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SAMEA2665130_2548 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SAMEA2665130_2548 (speC)
Enzymes [BR:
pshi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SAMEA2665130_2548 (speC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
SBT62002
LinkDB
All DBs
Position
1:complement(2784349..2786511)
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AA seq
720 aa
AA seq
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MKTLKIAASDSVLSCFDTEREITNVHTTDFSDIAAIVVSVQDIHDGILAKIHATGLSIPT
FAAVCCEEELSAEVLPQLTGVFELCGENTDFYGKQLESAAQRYEENLLPPFFNTLKQYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFEFFGETLFRADMCNADVKLGDLLIHEGAPCDAQ
KHAAKVYNADKTYFVLNGTSASNKVATNALLARGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPFGFIGGIDAHCFSEKYLRDEIRKVAPEKAEAKRPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDSHIKGQDRYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGESGRRL
WMECVKNGIEARKLLLETCSMIKPFVPVTVDGRKWQDHDTEVMANDLRFFNFVPSEKWHG
FEGYQEHQYFVDPCKFMLTTPGIDAATGEYTEFGIPATILANFLRENGIIPEKCDLNSIL
FLLTPAEDMAKLQHLIAQIARFERYVAEDAPLSEVLPNVYRSNEARYRGYTIRQLCQEMH
NLYVSYDVKQLQKEMFRQAHFPKAVMNPQDANIEFIRGNVELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAVQRYFLALEEGINLLPGFSPELQGVYIQEEDDGTKRAYGYVMKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttaaaaatagctgccagtgacagtgtgttatcctgtttcgacacggaacgt
gaaattacgaatgttcataccaccgatttctctgatatcgcggccatcgtagtttctgtt
caagacatccacgacggtattctggctaaaatccacgcgaccggcctgtctatcccgact
tttgccgcggtgtgctgtgaagaagagctgtctgctgaggtgctgccacagctgaccggg
gtattcgagctgtgtggtgagaatactgacttctacggtaagcaattggagtctgcggcg
cagcgttatgaagagaacctgctgccaccgttcttcaataccttgaagcaatatgtggaa
atgggtaactcaaccttcgcttgcccgggtcaccaaggtggtcaattcttccgtaagcat
cctgccggtcgtcaattcttcgagttcttcggtgaaacgctgttccgtgcggatatgtgt
aacgccgacgtgaaactgggtgacctgctgatccacgaaggtgcaccatgcgacgcgcaa
aaacacgccgccaaagtgtataacgcggataaaacctacttcgttctgaacgggacttct
gcatccaacaaggtagccactaacgcgctgctggctcgtggtgacttggtgctgtttgac
cgtaacaaccacaaatccaaccaccacggtgcgctgttgcaagccggtgcgaccccagtg
tatctggaaaccgcccgtaacccatttggtttcatcggtggtatcgatgcgcactgcttt
agcgaaaaatacctgcgtgatgaaatccgcaaagtagcgccagaaaaagccgaggccaag
cgtccgttccgtttagccatcattcagctgggtacttacgacggtactatctataacgct
cgtcaagtggttgataagattggtcacctgtgtgattacatcctgtttgactctgcatgg
gtaggttacgagcagttcatcccaatgatgaaagactgttcaccgctgctgctggatctg
aacgaaaacgacccaggcatcatcgtgacccagtctgtgcacaagcaacaagctggcttc
tctcagacctcacaaattcacaaaaaagacagccacatcaagggccaagaccgttattgc
aaccacaaacgctttaacaatgctttcatgatgcacgcttctaccagcccgttctatcct
ctgtttgcggcgctggatgtgaacgccaagatgcacgaaggcgaaagcggtcgtcgtctg
tggatggaatgcgttaaaaacggtatcgaagcgcgtaaattgctgctggaaacctgcagc
atgatcaaaccgttcgtaccggttaccgtggatggccgcaaatggcaggatcatgatacc
gaggtgatggctaatgatctgcgcttcttcaatttcgtgccgagtgagaagtggcatggc
tttgaaggctatcaagaacatcaatactttgttgacccttgtaagtttatgcttacaacg
ccaggcattgatgccgcaacgggggaatatactgaatttggtatcccagctaccattttg
gcgaacttcctgcgtgaaaacggcatcattccagagaagtgtgacttgaactccattctc
ttcttactgaccccagcagaagatatggctaagttgcaacaccttatcgcacaaattgca
cgttttgaacgctacgtagcagaagatgctccattaagtgaagtgttgccgaatgtgtat
cggagtaacgaggctcgttatcgcggttatactattcgtcaactgtgtcaggagatgcat
aacctgtacgtcagctatgatgtgaaacagctgcaaaaagagatgttccgtcaagctcac
ttcccgaaagcggtaatgaacccgcaggatgccaacattgagtttatccgcggtaacgtg
gagctggttccgctttgcaaggccgaaggccgtatcgcggcggaaggtgcactgccatat
ccacctggagttctgtgtgttgttccaggtgaagtgtggggcggtgcggtacagcgttac
ttcctggcgctcgaagagggcatcaacctgctgccaggcttctcgcctgaactgcaaggt
gtctacatccaagaagaggacgacggtactaaacgtgcgtacggctatgtaatgaaacag
taa
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