Plesiomonas shigelloides: SAMEA2665130_2573
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Entry
SAMEA2665130_2573 CDS
T04378
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshi03009
]
SAMEA2665130_2573 (rlmE)
Enzymes [BR:
pshi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
SAMEA2665130_2573 (rlmE)
Ribosome biogenesis [BR:
pshi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAMEA2665130_2573 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Methyltransf_25
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
SBT62023
UniProt:
A0A1A9B0X4
LinkDB
All DBs
Position
1:complement(2816798..2817427)
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AA seq
209 aa
AA seq
DB search
MVKKKRTGSSSRWLDEHFHDKYVQEAQKLGLRSRAYFKLKEIQQSDKLFKPGMTIVDLGA
APGGWSQYVVDQIGDQGHVIACDILPMDPIVGVDFLQGDFREEAVLNALLERTGQGQVDV
VMSDMAPNMSGNSVVDQPRAMYLVELALDMCRQVLVPKGAFVVKVFQGDGFDDYLNEVRK
MFTTVKIRKPDSSRSRSREVYIVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaagaagcgcacaggcagttcatcccgttggttggatgaacacttccacgat
aagtatgtacaagaagcgcagaaattgggattgcgttctcgagcttattttaagcttaaa
gagatccagcagtcagataaattattcaagcctggcatgaccattgtggatctgggtgct
gcgccgggaggttggtcacaatatgtcgttgatcagattggtgatcaagggcatgttata
gcctgtgatattttgccgatggatccgattgtcggcgtggattttctgcagggcgatttt
cgtgaagaggcggtgctcaatgcgctgctcgagcgtaccggccagggccaagtcgatgtg
gtgatgtcagacatggcgccaaacatgagcggtaactcggtggttgaccaaccgcgcgcg
atgtatctggtggagctggctttggatatgtgccgtcaggtattggtacccaagggagcc
tttgtggtcaaagtttttcaaggagatggatttgacgattacctcaatgaagtacggaaa
atgtttacgactgtaaaaattcgtaagccagactcttcgcggtcccgatcgcgagaagtt
tacattgtggctacagggtacaaactgtag
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