Plesiomonas shigelloides: SAMEA2665130_2587
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Entry
SAMEA2665130_2587 CDS
T04378
Symbol
ygaV
Name
(GenBank) Probable HTH-type transcriptional regulator ygaV
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
pshi
Plesiomonas shigelloides
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshi03000
]
SAMEA2665130_2587 (ygaV)
Transcription factors [BR:
pshi03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
SAMEA2665130_2587 (ygaV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
MarR_2
HTH_24
HTH_27
Rrf2
Fe_dep_repress
DUF7346
HxlR
HTH_34
DUF7344
HTH_IclR
HTH_1
HTH_10
HTH_11
HTH_Crp_2
HNF-1_N
TrmB
DUF7342
HTH_28
TFIIE_alpha
PaaX
MarR
HTH_35
DUF7347
DUF2582
DUF4423
MerR_1
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
SBT62037
UniProt:
A0A8I1W6E0
LinkDB
All DBs
Position
1:complement(2834748..2835140)
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AA seq
130 aa
AA seq
DB search
MMKDMSEIAHMERNVGQAVTLLKAMANEHRLFILCHLQDKEVSVGVLSERLGLSQSALSQ
HLAWLRRDGLVKTRKEAQTVYYSLSSHAVAEVIRTLHRLYCAAEQPSEAELASDVPERHS
EPSAASHSVG
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagatatgtctgaaattgcacacatggagcgtaatgtaggtcaggccgtcacg
ctgctgaaggctatggccaatgagcaccggttgtttattttatgtcatttacaggataaa
gaagtgtcggtcggcgttttgagcgagcgcttgggtttatcccagtcggcactgtcacag
caccttgcttggttgcggcgcgatgggctggtgaaaacgcgtaaagaagcgcaaaccgtc
tactactcgttaagcagccatgcagtggcggaagtgatccgtaccttacatcgtttgtat
tgcgcggcggagcagccttcagaggctgagctggctagcgacgtgccagagcggcatagt
gagccgtccgcggcgtcgcattcggtcggttaa
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integrated database retrieval system
